RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 GRIA4P48058 902 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 ENPEPQ07075 957 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 PDE4CQ08493 712 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 CAMK2BQ13554 666 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 TEAD4Q15561 434 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 TRIP4Q15650 581 aaPredicted RBP14.17□□□□□ -0.14
SS18-222ENST00000582792 NFIL3Q16649 462 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 PIGZQ86VD9 579 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 TTC39CQ8N584 583 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 SLC4A11Q8NBS3 891 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 CCDC150Q8NCX0 1101 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 WFIKKN2Q8TEU8 576 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 FAXDC2Q96IV6 333 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 LRIG1Q96JA1 1093 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 HEXIM2Q96MH2 286 aaKnown RBP14.17□□□□□ -0.14
SS18-222ENST00000582792 ARID3AQ99856 593 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 LMBRD1Q9NUN5 540 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 HOOK1Q9UJC3 728 aaKnown RBP14.17□□□□□ -0.14
SS18-222ENST00000582792 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.17□□□□□ -0.14
SS18-222ENST00000582792 ANKRD6Q9Y2G4 727 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 TRABD2BA6NFA1 517 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 TNFSF14O43557 240 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 ZBED1O96006 694 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 KRT13P13646 458 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 NR2F2P24468 414 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 HLA-FP30511 346 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 GRK6P43250 576 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 TKTL1P51854 596 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 ZBTB16Q05516 673 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 CYP4F3Q08477 520 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 PTPRNQ16849 979 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 FNDC3BQ53EP0 1204 aaKnown RBP14.16□□□□□ -0.14
SS18-222ENST00000582792 ARHGAP17Q68EM7 881 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 PM20D1Q6GTS8 502 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 BHLHA9Q7RTU4 235 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 MARCH9Q86YJ5 346 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 CYB5D2Q8WUJ1 264 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 IGSF8Q969P0 613 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 BIRC7Q96CA5 298 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 TMEM176AQ96HP8 235 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 BBC3Q96PG8 261 aaPredicted RBP14.16□□□□□ -0.14
SS18-222ENST00000582792 BTBD1Q9H0C5 482 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 MMRN2Q9H8L6 949 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 FBRSQ9HAH7 460 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 TMEM8AQ9HCN3 771 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 OLA1Q9NTK5 396 aaKnown RBP14.16□□□□□ -0.14
SS18-222ENST00000582792 PLA2G4CQ9UP65 541 aa14.16□□□□□ -0.14
SS18-222ENST00000582792 URB1O60287 2271 aaKnown RBP14.16□□□□□ -0.14
SS18-222ENST00000582792 PCDHGA12O60330 932 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 TSPAN3O60637 253 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 SEMA4FO95754 770 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 CD27P26842 260 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 HARS2P49590 506 aaKnown RBP14.15□□□□□ -0.14
SS18-222ENST00000582792 CCT8P50990 548 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 RAD23BP54727 409 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 SLC8A3P57103 927 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 ZNF445P59923 1031 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 RPS14P62263 151 aaKnown RBP14.15□□□□□ -0.14
SS18-222ENST00000582792 DPYDQ12882 1025 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 SMAD1Q15797 465 aaKnown RBP14.15□□□□□ -0.14
SS18-222ENST00000582792 LAYNQ6UX15 382 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 CHST9Q7L1S5 443 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 KIAA0907Q7Z7F0 614 aaPredicted RBP14.15□□□□□ -0.14
SS18-222ENST00000582792 ADIPOR2Q86V24 386 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 FMNL3Q8IVF7 1028 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 SCUBE3Q8IX30 993 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 FAM186BQ8IYM0 893 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 AHI1Q8N157 1196 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 ZNF366Q8N895 744 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.15□□□□□ -0.14
SS18-222ENST00000582792 ANKRD52Q8NB46 1076 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 CCDC47Q96A33 483 aaKnown RBP14.15□□□□□ -0.14
SS18-222ENST00000582792 GTPBP4Q9BZE4 634 aaKnown RBP14.15□□□□□ -0.14
SS18-222ENST00000582792 CISHQ9NSE2 258 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 ABCB8Q9NUT2 735 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 GGA2Q9UJY4 613 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 STOML2Q9UJZ1 356 aa14.15□□□□□ -0.14
SS18-222ENST00000582792 HBS1LQ9Y450 684 aaKnown RBP14.15□□□□□ -0.14
SS18-222ENST00000582792 GOLGA4Q13439 2230 aaKnown RBP14.15□□□□□ -0.14
SS18-222ENST00000582792 HELZ2Q9BYK8 2649 aaKnown RBP14.14□□□□□ -0.15
SS18-222ENST00000582792 A0A087WV48 116 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 FAM149AA5PLN7 773 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 H0Y8X5 98 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 KCNK3O14649 394 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 PAPSS1O43252 624 aaPredicted RBP14.14□□□□□ -0.15
SS18-222ENST00000582792 FSBPO95073 299 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 LATS1O95835 1130 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 DNTTP04053 509 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 PABPC1P11940 636 aaKnown RBP14.14□□□□□ -0.15
SS18-222ENST00000582792 GTF2H1P32780 548 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 PSMC2P35998 433 aaKnown RBP14.14□□□□□ -0.15
SS18-222ENST00000582792 CTSKP43235 329 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 MCCD1P59942 119 aaPredicted RBP14.14□□□□□ -0.15
SS18-222ENST00000582792 TTC31Q49AM3 519 aaPredicted RBP14.14□□□□□ -0.15
SS18-222ENST00000582792 KCNT1Q5JUK3 1230 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 KRT39Q6A163 491 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 ZC3H3Q8IXZ2 948 aaKnown RBP14.14□□□□□ -0.15
SS18-222ENST00000582792 PDCD7Q8N8D1 485 aaKnown RBP14.14□□□□□ -0.15
SS18-222ENST00000582792 SEMA4DQ92854 862 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 TMA16Q96EY4 203 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms