RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CABIN1Q9Y6J0 2220 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 CKAP5Q14008 2032 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 FAM237AA0A1B0GTK4 181 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 A0A1W2PQ27 194 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 A0A1W2PQ64 194 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 IRAK2O43187 625 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 RNASEH1O60930 286 aaKnown RBP18.66■□□□□ 0.58
MKS1-209ENST00000580127 VDRP11473 427 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 TBXAS1P24557 533 aaPredicted RBP18.66■□□□□ 0.58
MKS1-209ENST00000580127 ST8SIA6P61647 398 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 PKP1Q13835 747 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 INAVAQ3KP66 663 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 MPP7Q5T2T1 576 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 DBX2Q6ZNG2 339 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 TMEM245Q9H330 911 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 SGK2Q9HBY8 427 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 CNGB3Q9NQW8 809 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 ABCB8Q9NUT2 735 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 STOML2Q9UJZ1 356 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 TSPAN16Q9UKR8 245 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 CLEC4EQ9ULY5 219 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 SCML1Q9UN30 329 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 ZFYVE26Q68DK2 2539 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 ZZEF1O43149 2961 aa18.66■□□□□ 0.58
MKS1-209ENST00000580127 A0A1B0GVT2 93 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 TYW5A2RUC4 315 aaKnown RBP18.65■□□□□ 0.58
MKS1-209ENST00000580127 ZNF202O95125 648 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 SEMA4FO95754 770 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 DLDP09622 509 aaKnown RBP18.65■□□□□ 0.58
MKS1-209ENST00000580127 SETSIPP0DME0 302 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 HLA-EP13747 358 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 HOXD9P28356 352 aaPredicted RBP18.65■□□□□ 0.58
MKS1-209ENST00000580127 FKBP3Q00688 224 aaKnown RBP18.65■□□□□ 0.58
MKS1-209ENST00000580127 CUL2Q13617 745 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 ZCWPW2Q504Y3 356 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 NUGGCQ68CJ6 796 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 TMEM215Q68D42 235 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 ADAT2Q7Z6V5 191 aaKnown RBP18.65■□□□□ 0.58
MKS1-209ENST00000580127 SLCO6A1Q86UG4 719 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 CACUL1Q86Y37 369 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 SCML4Q8N228 414 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 RBBP8NLQ8NC74 664 aaPredicted RBP18.65■□□□□ 0.58
MKS1-209ENST00000580127 GANCQ8TET4 914 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 KCTD13Q8WZ19 329 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 EDEM1Q92611 657 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 IL21RQ9HBE5 538 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 SFMBT1Q9UHJ3 866 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 GGA2Q9UJY4 613 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 ANKRD6Q9Y2G4 727 aa18.65■□□□□ 0.58
MKS1-209ENST00000580127 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.65■□□□□ 0.58
MKS1-209ENST00000580127 TAF4O00268 1085 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 PRR29P0C7W0 189 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 PABPC1P11940 636 aaKnown RBP18.64■□□□□ 0.57
MKS1-209ENST00000580127 CD27P26842 260 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 HLA-FP30511 346 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 GRIA4P48058 902 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 ADIGQ0VDE8 80 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 CETN1Q12798 172 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 ACAP1Q15027 740 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 DCAF17Q5H9S7 520 aaPredicted RBP18.64■□□□□ 0.57
MKS1-209ENST00000580127 MBLAC2Q68D91 279 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 TMPRSS7Q7RTY8 843 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 C1orf216Q8TAB5 229 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 CYB5D2Q8WUJ1 264 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 IRGQQ8WZA9 623 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 IGSF8Q969P0 613 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 P2RY11Q96G91 374 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 FNDC3AQ9Y2H6 1198 aaKnown RBP18.64■□□□□ 0.57
MKS1-209ENST00000580127 COQ4Q9Y3A0 265 aa18.64■□□□□ 0.57
MKS1-209ENST00000580127 DSPP15924 2871 aaKnown RBP18.64■□□□□ 0.57
MKS1-209ENST00000580127 BAHCC1Q9P281 2608 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 ZFHX4Q86UP3 3567 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 SLC16A3O15427 465 aaKnown RBP18.63■□□□□ 0.57
MKS1-209ENST00000580127 TNFSF14O43557 240 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 FSBPO95073 299 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 CAPNS1P04632 268 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 ACSL1P33121 698 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 GRK6P43250 576 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 C21orf59P57076 290 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 STILQ15468 1287 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 ZNF776Q68DI1 518 aaPredicted RBP18.63■□□□□ 0.57
MKS1-209ENST00000580127 ADIPOR2Q86V24 386 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.63■□□□□ 0.57
MKS1-209ENST00000580127 UBA3Q8TBC4 463 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 NDRG1Q92597 394 aaKnown RBP18.63■□□□□ 0.57
MKS1-209ENST00000580127 AZIN2Q96A70 460 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 EEF2KMTQ96G04 330 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 C6orf106Q9H6K1 298 aaPredicted RBP18.63■□□□□ 0.57
MKS1-209ENST00000580127 PRSS16Q9NQE7 514 aa18.63■□□□□ 0.57
MKS1-209ENST00000580127 ARMCX3Q9UH62 379 aaPredicted RBP18.63■□□□□ 0.57
MKS1-209ENST00000580127 GOLGA4Q13439 2230 aaKnown RBP18.62■□□□□ 0.57
MKS1-209ENST00000580127 ACACAQ13085 2346 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 YJEFN3A6XGL0 299 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 E7ENQ6 273 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 PCDHGA12O60330 932 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 TBL1XO60907 577 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 ASLP04424 464 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 PAEPP09466 180 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 C7P10643 843 aa18.62■□□□□ 0.57
MKS1-209ENST00000580127 LCP1P13796 627 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms