RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 GSDMBQ8TAX9 411 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 INPP5DQ92835 1189 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 MCUR1Q96AQ8 359 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 RILPQ96NA2 401 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 VTA1Q9NP79 307 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 ARHGEF4Q9NR80 690 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 LAMA2P24043 3122 aaKnown RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 LAMA3Q16787 3333 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 MEI4A8MW99 385 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 GOLGA8TH3BQL2 631 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 M0QYT0 321 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 CALB2P22676 271 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 RASSF2P50749 326 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 PPP2R5DQ14738 602 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 SLC26A9Q7LBE3 791 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 GPR142Q7Z601 462 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 CHSY1Q86X52 802 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 STK32AQ8WU08 396 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 TFB1MQ8WVM0 346 aaKnown RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 CCDC97Q96F63 343 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 P2RY11Q96G91 374 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 NSL1Q96IY1 281 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 MAML3Q96JK9 1138 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 RHOBTB2Q9BYZ6 727 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 ANLNQ9NQW6 1124 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 LMCD1Q9NZU5 365 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 CLEC11AQ9Y240 323 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 PCDHGA4Q9Y5G9 962 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 SMAPO00193 183 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 TPP1O14773 563 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 GSC2O15499 205 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 KRT38O76015 456 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 PDHA1P08559 390 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 RARBP10826 455 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 YBX3P16989 372 aaKnown RBP eCLIP10.8□□□□□ -0.68
TOP3A-209ENST00000580095 ARL4AP40617 200 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 PTDSS1P48651 473 aaKnown RBP10.8□□□□□ -0.68
TOP3A-209ENST00000580095 BCAT1P54687 386 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 MAP3K7CLP57077 242 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 WSCD1Q658N2 575 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 NOTUMQ6P988 496 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 ATG14Q6ZNE5 492 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 BZW1Q7L1Q6 419 aaKnown RBP10.8□□□□□ -0.68
TOP3A-209ENST00000580095 CMC1Q7Z7K0 106 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 APPL2Q8NEU8 664 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 PPP1R14CQ8TAE6 165 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 AGR3Q8TD06 166 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 BRI3BPQ8WY22 251 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 PGBD4Q96DM1 585 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 QKIQ96PU8 341 aaKnown RBP eCLIP10.8□□□□□ -0.68
TOP3A-209ENST00000580095 BTBD10Q9BSF8 475 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 C11orf84Q9BUA3 381 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-209ENST00000580095 PRDM12Q9H4Q4 367 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 UBP1Q9NZI7 540 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 CITO14578 2027 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 DICER1Q9UPY3 1922 aaKnown RBP10.8□□□□□ -0.68
TOP3A-209ENST00000580095 FAM159BA6NKW6 160 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 B2RBV5 119 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 I6L893 689 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-209ENST00000580095 NRP1O14786 923 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 CCDC22O60826 627 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 GCATO75600 419 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 SPAG6O75602 509 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 ALDOAP04075 364 aaKnown RBP10.8□□□□□ -0.68
TOP3A-209ENST00000580095 DESP17661 470 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 RAB27AP51159 221 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 CCNA1P78396 465 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 RCN1Q15293 331 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 STILQ15468 1287 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 DUSP28Q4G0W2 176 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 ACSBG2Q5FVE4 666 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 OTUD1Q5VV17 481 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-209ENST00000580095 C4orf50Q6ZRC1 276 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 TNS4Q8IZW8 715 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 SLC25A41Q8N5S1 370 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 STKLD1Q8NE28 680 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 KCNK16Q96T55 309 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 SUDS3Q9H7L9 328 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-209ENST00000580095 PIGVQ9NUD9 493 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 SYBUQ9NX95 663 aa10.8□□□□□ -0.68
TOP3A-209ENST00000580095 DCAF8L1A6NGE4 600 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 DARSP14868 501 aaKnown RBP10.79□□□□□ -0.68
TOP3A-209ENST00000580095 GNAZP19086 355 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 GCKP35557 465 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 ABL2P42684 1182 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 MAGEA3P43357 314 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 PTPN9P43378 593 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 RBBP5Q15291 538 aaKnown RBP10.79□□□□□ -0.68
TOP3A-209ENST00000580095 DCAF4L1Q3SXM0 396 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 N4BP2L1Q5TBK1 243 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-209ENST00000580095 VWA5B1Q5TIE3 1220 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 KIAA0319Q5VV43 1072 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 RSPH3Q86UC2 560 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 B3GALNT2Q8NCR0 500 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 RNF139Q8WU17 664 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 EDEM1Q92611 657 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 TINF2Q9BSI4 451 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 MED10Q9BTT4 135 aa10.79□□□□□ -0.68
TOP3A-209ENST00000580095 PNPLA8Q9NP80 782 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms