RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CHFRQ96EP1 664 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 SENP8Q96LD8 212 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 ZSWIM1Q9BR11 485 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 MRPL45Q9BRJ2 306 aaKnown RBP10.61□□□□□ -0.71
SS18-210ENST00000578700 DUSP15Q9H1R2 295 aaPredicted RBP10.61□□□□□ -0.71
SS18-210ENST00000578700 GOLPH3Q9H4A6 298 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 FBRSL1Q9HCM7 1045 aaKnown RBP10.61□□□□□ -0.71
SS18-210ENST00000578700 ABCB6Q9NP58 842 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 MAGED2Q9UNF1 606 aaPredicted RBP10.61□□□□□ -0.71
SS18-210ENST00000578700 LAMA5O15230 3695 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 PKD1L2Q7Z442 2459 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 CCDC163A0A0D9SF12 145 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 TARSL2A2RTX5 802 aaKnown RBP10.6□□□□□ -0.71
SS18-210ENST00000578700 OTOL1A6NHN0 477 aaPredicted RBP10.6□□□□□ -0.71
SS18-210ENST00000578700 CCDC188H7C350 402 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 O00370 1275 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 CYB561D2O14569 222 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 PROSCO94903 275 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 RHOXF2BP0C7M4 288 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 ODC1P11926 461 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 TYMPP19971 482 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 WARSP23381 471 aaKnown RBP10.6□□□□□ -0.71
SS18-210ENST00000578700 CTNNA2P26232 953 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 MAN1A1P33908 653 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 AVPR1AP37288 418 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 LHX1P48742 406 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 TUFMP49411 452 aaKnown RBP10.6□□□□□ -0.71
SS18-210ENST00000578700 PSMC1P62191 440 aaKnown RBP10.6□□□□□ -0.71
SS18-210ENST00000578700 ZNF252P-AS1Q0IIN9 211 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 ORC1Q13415 861 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 PIGHQ14442 188 aaPredicted RBP10.6□□□□□ -0.71
SS18-210ENST00000578700 ZNF268Q14587 947 aaPredicted RBP10.6□□□□□ -0.71
SS18-210ENST00000578700 LONRF2Q1L5Z9 754 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 SOWAHAQ2M3V2 549 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 GOLGA7BQ2TAP0 167 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 UAP1L1Q3KQV9 507 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 SH3PXD2AQ5TCZ1 1133 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 NAIF1Q69YI7 327 aaPredicted RBP10.6□□□□□ -0.71
SS18-210ENST00000578700 C8orf74Q6P047 294 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 ACOT1Q86TX2 421 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 TTC30AQ86WT1 665 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 RHOT1Q8IXI2 618 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 CMTM8Q8IZV2 173 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 PDCL2Q8N4E4 241 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 MMGT1Q8N4V1 131 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 CAMKK1Q8N5S9 505 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 LRRN4CLQ8ND94 238 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 OR10T2Q8NGX3 314 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 RPLP0P6Q8NHW5 317 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 MAIP1Q8WWC4 291 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 ANKRD7Q92527 254 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 TSC1Q92574 1164 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 TWNKQ96RR1 684 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 RHOXF2Q9BQY4 288 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 HPS4Q9NQG7 708 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 ST7Q9NRC1 585 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 ABI2Q9NYB9 513 aaPredicted RBP10.6□□□□□ -0.71
SS18-210ENST00000578700 HMGXB4Q9UGU5 601 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 TSPAN16Q9UKR8 245 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 DSEQ9UL01 958 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 CCL26Q9Y258 94 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 FREM2Q5SZK8 3169 aa10.6□□□□□ -0.71
SS18-210ENST00000578700 GOLGA8SH3BPF8 625 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 KRIT1O00522 736 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 TRDMT1O14717 391 aaKnown RBP10.59□□□□□ -0.71
SS18-210ENST00000578700 KRT3P12035 628 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 CTNNA1P35221 906 aaKnown RBP10.59□□□□□ -0.71
SS18-210ENST00000578700 AARSP49588 968 aaKnown RBP eCLIP10.59□□□□□ -0.71
SS18-210ENST00000578700 C2orf54Q08AI8 447 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 PDCLQ13371 301 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 MAP9Q49MG5 647 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 ZFYVE27Q5T4F4 411 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 ARHGAP17Q68EM7 881 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 TXNDC8Q6A555 127 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 TMCO3Q6UWJ1 677 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 PHLDB2Q86SQ0 1253 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 ZDHHC17Q8IUH5 632 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 CRYBG2Q8N1P7 616 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 THEM5Q8N1Q8 247 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 RASGEF1CQ8N431 466 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 PIP4P2Q8N4L2 257 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 STKLD1Q8NE28 680 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 SPATA18Q8TC71 538 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 STK32AQ8WU08 396 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 ZC3H10Q96K80 434 aaKnown RBP10.59□□□□□ -0.71
SS18-210ENST00000578700 MCEEQ96PE7 176 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 P2RY13Q9BPV8 354 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 FAM83CQ9BQN1 747 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 TPSD1Q9BZJ3 242 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 IL21Q9HBE4 155 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 CHORDC1Q9UHD1 332 aaPredicted RBP10.59□□□□□ -0.71
SS18-210ENST00000578700 TTC7AQ9ULT0 858 aaPredicted RBP10.59□□□□□ -0.71
SS18-210ENST00000578700 L1RE1Q9UN81 338 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 PCDHA3Q9Y5H8 950 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 MYO16Q9Y6X6 1858 aa10.59□□□□□ -0.71
SS18-210ENST00000578700 OBSL1O75147 1896 aa10.58□□□□□ -0.72
SS18-210ENST00000578700 BCLAF3A2AJT9 711 aaKnown RBP10.58□□□□□ -0.72
SS18-210ENST00000578700 TMEM191CA6NGB0 347 aa10.58□□□□□ -0.72
SS18-210ENST00000578700 SIGLEC16A6NMB1 481 aa10.58□□□□□ -0.72
SS18-210ENST00000578700 KHNYNO15037 678 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms