RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 PRDM16Q9HAZ2 1276 aa14.36□□□□□ -0.11
LINC01543-201ENST00000578367 RCOR3Q9P2K3 495 aaPredicted RBP14.36□□□□□ -0.11
LINC01543-201ENST00000578367 PPARGC1AQ9UBK2 798 aaKnown RBP14.36□□□□□ -0.11
LINC01543-201ENST00000578367 SALL4Q9UJQ4 1053 aa14.36□□□□□ -0.11
LINC01543-201ENST00000578367 FZD10Q9ULW2 581 aa14.36□□□□□ -0.11
LINC01543-201ENST00000578367 ALG6Q9Y672 507 aa14.36□□□□□ -0.11
LINC01543-201ENST00000578367 DUSP10Q9Y6W6 482 aa14.36□□□□□ -0.11
LINC01543-201ENST00000578367 ANAPC1Q9H1A4 1944 aa14.36□□□□□ -0.11
LINC01543-201ENST00000578367 DOCK6Q96HP0 2047 aa14.36□□□□□ -0.11
LINC01543-201ENST00000578367 MYO16Q9Y6X6 1858 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 DOCK8Q8NF50 2099 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 MIF4GDA9UHW6 222 aaKnown RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 ZNF487B1APH4 448 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 F5H5T6 163 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 PSTPIP1O43586 416 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 MOCS2O96007 188 aaPredicted RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 PENKP01210 267 aaPredicted RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 TACR2P21452 398 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 MSNP26038 577 aaKnown RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 EIF2DP41214 584 aaKnown RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 HCAR3P49019 387 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 OXCT1P55809 520 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 SLC25A11Q02978 314 aaKnown RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 GAD2Q05329 585 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 DHCR24Q15392 516 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 ITPRIPL2Q3MIP1 535 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 PIK3R6Q5UE93 754 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 DAAM2Q86T65 1068 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 RNF135Q8IUD6 432 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 MAP7D3Q8IWC1 876 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 SUGP1Q8IWZ8 645 aaKnown RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 RHOT1Q8IXI2 618 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 LRRC57Q8N9N7 239 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 HJURPQ8NCD3 748 aaPredicted RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 CSGALNACT1Q8TDX6 532 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 RSAD2Q8WXG1 361 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 WBP2Q969T9 261 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 TRIM44Q96DX7 344 aaPredicted RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 TMA16Q96EY4 203 aaKnown RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 BTBD6Q96KE9 485 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 RPP25Q9BUL9 199 aaKnown RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 SLC2A11Q9BYW1 496 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 ECT2Q9H8V3 914 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 DDX56Q9NY93 547 aaKnown RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 GUCA1BQ9UMX6 200 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 HS3ST4Q9Y661 456 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 WNT6Q9Y6F9 365 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 OBSL1O75147 1896 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 NUP210Q8TEM1 1887 aaPredicted RBP14.35□□□□□ -0.11
LINC01543-201ENST00000578367 DENND4CQ5VZ89 1909 aa14.35□□□□□ -0.11
LINC01543-201ENST00000578367 PRUNE2Q8WUY3 3088 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 EYSQ5T1H1 3165 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 IGLV3-10A0A075B6K4 115 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 MACROD2A1Z1Q3 448 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 DRGXA6NNA5 263 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.34□□□□□ -0.11
LINC01543-201ENST00000578367 SPOPO43791 374 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 HOXC13P31276 330 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 ATXN1P54253 815 aaKnown RBP14.34□□□□□ -0.11
LINC01543-201ENST00000578367 SEMA3BQ13214 749 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 AUHQ13825 339 aaKnown RBP14.34□□□□□ -0.11
LINC01543-201ENST00000578367 GRM2Q14416 872 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 PDK2Q15119 407 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 DPYSL2Q16555 572 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 RHBDF2Q6PJF5 856 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 CHST9Q7L1S5 443 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 CHSY1Q86X52 802 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 FAM71BQ8TC56 605 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 EPAS1Q99814 870 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 LINC00597Q9H2U6 94 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 HPS4Q9NQG7 708 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 WNT16Q9UBV4 365 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 OR12D3Q9UGF7 316 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 AP4E1Q9UPM8 1137 aa14.34□□□□□ -0.11
LINC01543-201ENST00000578367 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.34□□□□□ -0.11
LINC01543-201ENST00000578367 COL6A3P12111 3177 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 CCDC66A2RUB6 948 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 GRID2IPA4D2P6 1211 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 BUB1O43683 1085 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 CLDN11O75508 207 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 CYP17A1P05093 508 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 ASGR2P07307 311 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 ADH5P11766 374 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 COMTP21964 271 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 MANEALQ5VSG8 457 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 NADSYN1Q6IA69 706 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 CYP4V2Q6ZWL3 525 aaPredicted RBP14.33□□□□□ -0.12
LINC01543-201ENST00000578367 RALGPS2Q86X27 583 aaPredicted RBP14.33□□□□□ -0.12
LINC01543-201ENST00000578367 CCDC117Q8IWD4 279 aaPredicted RBP14.33□□□□□ -0.12
LINC01543-201ENST00000578367 CCDC185Q8N715 623 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 TTC16Q8NEE8 873 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 CD101Q93033 1021 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 ASIC4Q96FT7 647 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 XPO6Q96QU8 1125 aaKnown RBP14.33□□□□□ -0.12
LINC01543-201ENST00000578367 UHRF1Q96T88 793 aaPredicted RBP14.33□□□□□ -0.12
LINC01543-201ENST00000578367 SNRNP25Q9BV90 132 aaKnown RBP14.33□□□□□ -0.12
LINC01543-201ENST00000578367 EBF3Q9H4W6 596 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 ZWILCHQ9H900 591 aa14.33□□□□□ -0.12
LINC01543-201ENST00000578367 LZTFL1Q9NQ48 299 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms