RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 C2CD6Q53TS8 623 aa27.39■■□□□ 1.98
PPP4R1-204ENST00000577393 MPP7Q5T2T1 576 aa27.39■■□□□ 1.98
PPP4R1-204ENST00000577393 LAIR1Q6GTX8 287 aa27.39■■□□□ 1.98
PPP4R1-204ENST00000577393 SDE2Q6IQ49 451 aa27.39■■□□□ 1.98
PPP4R1-204ENST00000577393 XYLT1Q86Y38 959 aa27.39■■□□□ 1.98
PPP4R1-204ENST00000577393 MYEOVQ96EZ4 313 aa27.39■■□□□ 1.98
PPP4R1-204ENST00000577393 TPSD1Q9BZJ3 242 aa27.39■■□□□ 1.98
PPP4R1-204ENST00000577393 CBX8Q9HC52 389 aa27.39■■□□□ 1.98
PPP4R1-204ENST00000577393 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.39■■□□□ 1.98
PPP4R1-204ENST00000577393 COX16Q9P0S2 106 aa27.39■■□□□ 1.98
PPP4R1-204ENST00000577393 GMEB2Q9UKD1 530 aa27.39■■□□□ 1.98
PPP4R1-204ENST00000577393 TCRBV21S2A2A0A5A6 115 aa27.38■■□□□ 1.97
PPP4R1-204ENST00000577393 CYP1A1P04798 512 aaPredicted RBP27.38■■□□□ 1.97
PPP4R1-204ENST00000577393 HOXB2P14652 356 aa27.38■■□□□ 1.97
PPP4R1-204ENST00000577393 NOS2P35228 1153 aa27.38■■□□□ 1.97
PPP4R1-204ENST00000577393 RNASE9P60153 205 aaKnown RBP27.38■■□□□ 1.97
PPP4R1-204ENST00000577393 FILIP1LQ4L180 1135 aa27.38■■□□□ 1.97
PPP4R1-204ENST00000577393 MSANTD4Q8NCY6 345 aa27.38■■□□□ 1.97
PPP4R1-204ENST00000577393 BTN2A3PQ96KV6 586 aa27.38■■□□□ 1.97
PPP4R1-204ENST00000577393 PRICKLE1Q96MT3 831 aaPredicted RBP27.38■■□□□ 1.97
PPP4R1-204ENST00000577393 ELOVL2Q9NXB9 296 aa27.38■■□□□ 1.97
PPP4R1-204ENST00000577393 CACNA2D2Q9NY47 1150 aa27.38■■□□□ 1.97
PPP4R1-204ENST00000577393 A0A1W2PQF6 199 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 HLA-FP30511 346 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 SCNN1AP37088 669 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 MATKP42679 507 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 ARID5AQ03989 594 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 MS4A13Q5J8X5 152 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 FAM102AQ5T9C2 384 aaPredicted RBP27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 TMEM215Q68D42 235 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 RNF43Q68DV7 783 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 CACNA2D4Q7Z3S7 1137 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 KBTBD6Q86V97 674 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 FAM160A2Q8N612 972 aaPredicted RBP27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 ATP6V0D2Q8N8Y2 350 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 HJURPQ8NCD3 748 aaPredicted RBP27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 UCMAQ8WVF2 138 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 HMGB4Q8WW32 186 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 RNF34Q969K3 372 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 NAP1L5Q96NT1 182 aaPredicted RBP27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 GABRG3Q99928 467 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 STIM2Q9P246 746 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 SLC12A6Q9UHW9 1150 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 INVSQ9Y283 1065 aa27.37■■□□□ 1.97
PPP4R1-204ENST00000577393 SDK1Q7Z5N4 2213 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 KCNU1A8MYU2 1149 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 WASH3PC4AMC7 463 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 DCLK1O15075 740 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 SLC2A3P11169 496 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 CCR1P32246 355 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 RPS24P62847 133 aaKnown RBP27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 NME3Q13232 169 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 EIF4HQ15056 248 aaKnown RBP27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 SKOR2Q2VWA4 1001 aaPredicted RBP27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 ZSCAN23Q3MJ62 389 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 USP39Q53GS9 565 aaKnown RBP27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 RAP1GAP2Q684P5 730 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 LUZP1Q86V48 1076 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 WFDC5Q8TCV5 224 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 CIPCQ9C0C6 399 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 ABCB8Q9NUT2 735 aa27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 BCCIPQ9P287 314 aaKnown RBP eCLIP27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 THAP10Q9P2Z0 257 aaPredicted RBP27.36■■□□□ 1.97
PPP4R1-204ENST00000577393 A0A1B0GTH6 734 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 GOLGA8SH3BPF8 625 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 M0QYT0 321 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 KIAA1211LQ6NV74 962 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 TRIM72Q6ZMU5 477 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 CHSY1Q86X52 802 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 LGI2Q8N0V4 545 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.35■■□□□ 1.972e-7■■□□□ 14.2
PPP4R1-204ENST00000577393 SORCS1Q8WY21 1168 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 ERLEC1Q96DZ1 483 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 PCDHB18PQ96TA0 734 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 NPY6RQ99463 290 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 RRN3Q9NYV6 651 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 CALCOCO1Q9P1Z2 691 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 RAD54BQ9Y620 910 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 STON1Q9Y6Q2 735 aa27.35■■□□□ 1.97
PPP4R1-204ENST00000577393 ZNF292O60281 2723 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 TYW5A2RUC4 315 aaKnown RBP27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 NPC1O15118 1278 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 TIMM44O43615 452 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 SERPINC1P01008 464 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 RETP07949 1114 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 PABPC1P11940 636 aaKnown RBP27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 ABCB4P21439 1286 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 TACR2P21452 398 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 OTUD1Q5VV17 481 aaPredicted RBP27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 MMS22LQ6ZRQ5 1243 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 CHST9Q7L1S5 443 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 KIAA0907Q7Z7F0 614 aaPredicted RBP27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 KIAA2013Q8IYS2 634 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 CFAP52Q8N1V2 620 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 PGBD3Q8N328 593 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 SLC30A5Q8TAD4 765 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 OLIG1Q8TAK6 271 aa27.34■■□□□ 1.97
PPP4R1-204ENST00000577393 WFIKKN2Q8TEU8 576 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms