RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 EXOSC4Q9NPD3 245 aaKnown RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 PTTG2Q9NZH5 202 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 ANXA9O76027 345 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 RBP1P09455 135 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 GABRB2P47870 512 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 NAGLUP54802 743 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 RHBDL3P58872 404 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 TTLL4Q14679 1199 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 CCDC85BQ15834 202 aaPredicted RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZNF618Q5T7W0 954 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 TWF2Q6IBS0 349 aaKnown RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 SCN4BQ8IWT1 228 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 ADCY4Q8NFM4 1077 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 RP9Q8TA86 221 aaKnown RBP13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 RBBP8Q99708 897 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 BDH2Q9BUT1 245 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 WDR18Q9BV38 432 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 OSBPL11Q9BXB4 747 aa13.44□□□□□ -0.26
PCDHGB3-201ENST00000576222 AVILO75366 819 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 MTA2O94776 668 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 ACAT1P24752 427 aaKnown RBP13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 PEX2P28328 305 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 MAPK11Q15759 364 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 SPANXN3Q5MJ09 141 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 SATL1Q86VE3 508 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZFAND2BQ8WV99 257 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZBTB45Q96K62 511 aaPredicted RBP13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 PLEKHG4BQ96PX9 1271 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 PDCD2LQ9BRP1 358 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 SLC4A5Q9BY07 1137 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 PNPOQ9NVS9 261 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 GPRC5DQ9NZD1 345 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZNF70Q9UC06 446 aaPredicted RBP13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 PRKAG3Q9UGI9 489 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 SLIT3O75094 1523 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 C3P01024 1663 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 FKBP9O95302 570 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 ATP6V1B2P21281 511 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 CCNFP41002 786 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 KRR1Q13601 381 aaKnown RBP13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 FKBP9P1Q75LS8 142 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 SYTL5Q8TDW5 730 aaPredicted RBP13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 RCN3Q96D15 328 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 BTBD9Q96Q07 612 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 POLR1BQ9H9Y6 1135 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 HMG20AQ9NP66 347 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 SYBUQ9NX95 663 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZMYND8Q9ULU4 1186 aaPredicted RBP13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZC3H4Q9UPT8 1303 aaKnown RBP13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 ERVK-10P10266 1014 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 PLIN5Q00G26 463 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 RUNX1T1Q06455 604 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 KIZQ2M2Z5 673 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 BTBD8Q5XKL5 378 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 HEATR4Q86WZ0 1026 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 OSCP1Q8WVF1 389 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 RMDN1Q96DB5 314 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 PPP1R2P1Q96PQ5 205 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 TUBGCP5Q96RT8 1024 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 CDH22Q9UJ99 828 aa13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 FAM208AQ9UK61 1670 aaKnown RBP13.43□□□□□ -0.26
PCDHGB3-201ENST00000576222 NELFEP18615 380 aaKnown RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 PSME3P61289 254 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 GTF2H3Q13889 308 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 CYP51A1Q16850 503 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 SPRED3Q2MJR0 410 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 MPZL3Q6UWV2 235 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 TMC5Q6UXY8 1006 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 ANKS1BQ7Z6G8 1248 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 KCNMB4Q86W47 210 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 FNIP1Q8TF40 1166 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 ATG4CQ96DT6 458 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 EBNA1BP2Q99848 306 aaKnown RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 CYP3A43Q9HB55 503 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 MAGEB16A2A368 324 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 TRIM38O00635 465 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 HDAC3O15379 428 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 CSDE1O75534 798 aaKnown RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 LINGO3P0C6S8 592 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 SUPT20HL2P0C7V6 817 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 DMPKQ09013 629 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZNF235Q14590 738 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 NR1D2Q14995 579 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 AMIGO2Q86SJ2 522 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 CHSY1Q86X52 802 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 C12orf56Q8IXR9 622 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 TMEM161BQ8NDZ6 487 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 CLK4Q9HAZ1 481 aaKnown RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 MAP3K20Q9NYL2 800 aaKnown RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 GNEQ9Y223 722 aaKnown RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 NDUFS3O75489 264 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 TOMM70O94826 608 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 MSX2P35548 267 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 NR2C2P49116 596 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 MTTPP55157 894 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 USP4Q13107 963 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 TAS2R42Q7RTR8 314 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 CPT1BQ92523 772 aa13.42□□□□□ -0.26
PCDHGB3-201ENST00000576222 NKD2Q969F2 451 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms