RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 BYSLQ13895 437 aaKnown RBP18.12■□□□□ 0.49
SMG6-214ENST00000573827 PTPRNQ16849 979 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 VWA3BQ502W6 1294 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 CYP2U1Q7Z449 544 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 CREBRFQ8IUR6 639 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 UNC45BQ8IWX7 931 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 FAM71AQ8IYT1 594 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 ADAM32Q8TC27 787 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 TUBGCP2Q9BSJ2 902 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 NAA15Q9BXJ9 866 aaKnown RBP18.12■□□□□ 0.49
SMG6-214ENST00000573827 TMEM245Q9H330 911 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 XPO7Q9UIA9 1087 aaKnown RBP18.12■□□□□ 0.49
SMG6-214ENST00000573827 DNAJC12Q9UKB3 198 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 PILRBQ9UKJ0 227 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 TLR6Q9Y2C9 796 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 SPEGQ15772 3267 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 ASPMQ8IZT6 3477 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 NUMA1Q14980 2115 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 CDX4O14627 284 aaPredicted RBP18.11■□□□□ 0.49
SMG6-214ENST00000573827 COPAP53621 1224 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 HSP90AA4PQ58FG1 418 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 CT47A1Q5JQC4 288 aaPredicted RBP18.11■□□□□ 0.49
SMG6-214ENST00000573827 SDE2Q6IQ49 451 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 ARMCX6Q7L4S7 300 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 SLC47A2Q86VL8 602 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 SLC41A1Q8IVJ1 513 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 PGBD3Q8N328 593 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 SERPINB11Q96P15 392 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 SLC2A13Q96QE2 648 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 NUCKS1Q9H1E3 243 aaKnown RBP18.11■□□□□ 0.49
SMG6-214ENST00000573827 LHX5Q9H2C1 402 aa18.11■□□□□ 0.49
SMG6-214ENST00000573827 USP36Q9P275 1121 aaKnown RBP18.11■□□□□ 0.49
SMG6-214ENST00000573827 EVLQ9UI08 416 aaPredicted RBP18.11■□□□□ 0.49
SMG6-214ENST00000573827 KMT2BQ9UMN6 2715 aaPredicted RBP18.1■□□□□ 0.49
SMG6-214ENST00000573827 CEP192Q8TEP8 1941 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 IRAK2O43187 625 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 TIMM44O43615 452 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 ZNF217O75362 1048 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 ITPKAP23677 461 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 CD70P32970 193 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 ANP32AP39687 249 aaKnown RBP18.1■□□□□ 0.49
SMG6-214ENST00000573827 SLC11A2P49281 568 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 YWHAZP63104 245 aaKnown RBP18.1■□□□□ 0.49
SMG6-214ENST00000573827 IRX4P78413 519 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 SYT12Q8IV01 421 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 WFIKKN2Q8TEU8 576 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 PIGKQ92643 395 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 GOLGA1Q92805 767 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 FAM149B1Q96BN6 582 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 EDEM2Q9BV94 578 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 CIPCQ9C0C6 399 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 POPDC2Q9HBU9 364 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 ABCB8Q9NUT2 735 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 GGA2Q9UJY4 613 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 INTS6Q9UL03 887 aaKnown RBP18.1■□□□□ 0.49
SMG6-214ENST00000573827 CYP8B1Q9UNU6 501 aa18.1■□□□□ 0.49
SMG6-214ENST00000573827 CACNA1BQ00975 2339 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 PCNX2A6NKB5 2137 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 KCNJ18B7U540 433 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 MAP3K13O43283 966 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 TBL1XO60907 577 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 TRUB2O95900 331 aaKnown RBP18.09■□□□□ 0.49
SMG6-214ENST00000573827 IGLV3-19P01714 112 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 PABPC1P11940 636 aaKnown RBP18.09■□□□□ 0.49
SMG6-214ENST00000573827 USP8P40818 1118 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 RPS24P62847 133 aaKnown RBP18.09■□□□□ 0.49
SMG6-214ENST00000573827 CAMK2GQ13555 558 aaPredicted RBP18.09■□□□□ 0.49
SMG6-214ENST00000573827 PTPN20Q4JDL3 420 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 MS4A13Q5J8X5 152 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 PPM1JQ5JR12 505 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 KLHDC7AQ5VTJ3 777 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 OTUD1Q5VV17 481 aaPredicted RBP18.09■□□□□ 0.49
SMG6-214ENST00000573827 CDKAL1Q5VV42 579 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 LYSMD4Q5XG99 296 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 OLFML1Q6UWY5 402 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 SLC36A4Q6YBV0 504 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 PASD1Q8IV76 773 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 FAM114A1Q8IWE2 563 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 CYB5D2Q8WUJ1 264 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 UCMAQ8WVF2 138 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 MYO19Q96H55 970 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 ZNF419Q96HQ0 510 aaPredicted RBP18.09■□□□□ 0.49
SMG6-214ENST00000573827 LSM14BQ9BX40 385 aaKnown RBP18.09■□□□□ 0.49
SMG6-214ENST00000573827 ITM2CQ9NQX7 267 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 ASNSD1Q9NWL6 643 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 FHOD1Q9Y613 1164 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 PCDH15Q96QU1 1955 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 IGF2RP11717 2491 aa18.09■□□□□ 0.49
SMG6-214ENST00000573827 AKAP13Q12802 2813 aa18.08■□□□□ 0.49
SMG6-214ENST00000573827 KCNU1A8MYU2 1149 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 KHNYNO15037 678 aaKnown RBP18.08■□□□□ 0.48
SMG6-214ENST00000573827 ERBB2P04626 1255 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 GLI1P08151 1106 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 ADRB1P08588 477 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 HLA-EP13747 358 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 HOXD12P35452 270 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 RPL6Q02878 288 aaKnown RBP18.08■□□□□ 0.48
SMG6-214ENST00000573827 KCNJ12Q14500 433 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 STARD3Q14849 445 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 TPD52L1Q16890 204 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms