RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 SMYD2Q9NRG4 433 aa16.8■□□□□ 0.28
POLR2A-201ENST00000572844 MOCS1Q9NZB8 636 aa16.8■□□□□ 0.28
POLR2A-201ENST00000572844 IGSF9Q9P2J2 1179 aa16.8■□□□□ 0.28
POLR2A-201ENST00000572844 MYBPHLA2RUH7 354 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 HHLA1C9JL84 531 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 RNF103O00237 685 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 NCAM2O15394 837 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 TGDSO95455 350 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 NQO1P15559 274 aaKnown RBP16.79■□□□□ 0.28
POLR2A-201ENST00000572844 IGFBP6P24592 240 aaPredicted RBP16.79■□□□□ 0.28
POLR2A-201ENST00000572844 CTGFP29279 349 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 NAB1Q13506 487 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 UPP1Q16831 310 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 CXCL17Q6UXB2 119 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 TIFABQ6ZNK6 161 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 SAPCD2Q86UD0 394 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 P2RY11Q96G91 374 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 SMARCD1Q96GM5 515 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 LGMNQ99538 433 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 ARHGEF3Q9NR81 526 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 GGT7Q9UJ14 662 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 FBXW11Q9UKB1 542 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 CASP8AP2Q9UKL3 1982 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 SDR42E2A6NKP2 422 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 C2CD2LO14523 706 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 CAPN9O14815 690 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 TROVE2P10155 538 aaKnown RBP eCLIP16.79■□□□□ 0.28
POLR2A-201ENST00000572844 NME3Q13232 169 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 DENND5BQ6ZUT9 1274 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 MPP5Q8N3R9 675 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 SLC7A14Q8TBB6 771 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 TTC17Q96AE7 1141 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 STAMBPL1Q96FJ0 436 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 TXLNGQ9NUQ3 528 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 MAD1L1Q9Y6D9 718 aa16.79■□□□□ 0.28
POLR2A-201ENST00000572844 YJEFN3A6XGL0 299 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 E7ENQ6 273 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 COPEO14579 308 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 RFPL1O75677 317 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 UNC5CO95185 931 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 LTFP02788 710 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 CYP11A1P05108 521 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 ODC1P11926 461 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 WASHC5Q12768 1159 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 SREBF2Q12772 1141 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 CRHR2Q13324 411 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 SNCBQ16143 134 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 ARL13BQ3SXY8 428 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 FAM171BQ6P995 826 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 TRIM42Q8IWZ5 723 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 C3orf58Q8NDZ4 430 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 OXNAD1Q96HP4 312 aaPredicted RBP16.78■□□□□ 0.28
POLR2A-201ENST00000572844 LRRC37BQ96QE4 947 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 ACBD6Q9BR61 282 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 PRDM12Q9H4Q4 367 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 CHKBQ9Y259 395 aa16.78■□□□□ 0.28
POLR2A-201ENST00000572844 SEPT4O43236 478 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 CREB3O43889 395 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 SCNN1GP51170 649 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 AFF1P51825 1210 aaKnown RBP16.77■□□□□ 0.28
POLR2A-201ENST00000572844 AP1B1Q10567 949 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 DSC3Q14574 896 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 TIGD5Q53EQ6 642 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 PM20D1Q6GTS8 502 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 ZNF449Q6P9G9 518 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 MARK2Q7KZI7 788 aaKnown RBP16.77■□□□□ 0.28
POLR2A-201ENST00000572844 BEND5Q7L4P6 421 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 BHLHA9Q7RTU4 235 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 RNF169Q8NCN4 708 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 LPPQ93052 612 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 KLHL29Q96CT2 875 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 SRPK1Q96SB4 655 aaKnown RBP16.77■□□□□ 0.28
POLR2A-201ENST00000572844 MYLK2Q9H1R3 596 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 TMPRSS4Q9NRS4 437 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 DSEQ9UL01 958 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 PLLPQ9Y342 182 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 NLRC5Q86WI3 1866 aa16.77■□□□□ 0.28
POLR2A-201ENST00000572844 MTSS1O43312 755 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 CSH1P0DML2 217 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 CSH2P0DML3 217 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 GRIA1P42261 906 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 FCGRTP55899 365 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 GPRIN1Q7Z2K8 1008 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 PDCD7Q8N8D1 485 aaKnown RBP16.77■□□□□ 0.27
POLR2A-201ENST00000572844 TRIB2Q92519 343 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 FAM111AQ96PZ2 611 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 KCNK16Q96T55 309 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 RTP3Q9BQQ7 232 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 TRIM62Q9BVG3 475 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 IQCGQ9H095 443 aaKnown RBP16.77■□□□□ 0.27
POLR2A-201ENST00000572844 AGO3Q9H9G7 860 aaKnown RBP16.77■□□□□ 0.27
POLR2A-201ENST00000572844 CACNG4Q9UBN1 327 aa16.77■□□□□ 0.27
POLR2A-201ENST00000572844 CHUKO15111 745 aa16.76■□□□□ 0.27
POLR2A-201ENST00000572844 ADAMTS4O75173 837 aa16.76■□□□□ 0.27
POLR2A-201ENST00000572844 CTSHP09668 335 aa16.76■□□□□ 0.27
POLR2A-201ENST00000572844 ERCC2P18074 760 aa16.76■□□□□ 0.27
POLR2A-201ENST00000572844 PGAM1P18669 254 aa16.76■□□□□ 0.27
POLR2A-201ENST00000572844 SERPINB4P48594 390 aa16.76■□□□□ 0.27
POLR2A-201ENST00000572844 CXCR3P49682 368 aa16.76■□□□□ 0.27
POLR2A-201ENST00000572844 FAM182AQ5T1J6 154 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms