RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SLC6A4P31645 630 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 GBP1P32455 592 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 SLC11A2P49281 568 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 ATXN1P54253 815 aaKnown RBP16.41■□□□□ 0.22
CHD3-215ENST00000572750 EIF4EBP2Q13542 120 aaPredicted RBP16.41■□□□□ 0.22
CHD3-215ENST00000572750 LRRC32Q14392 662 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 ADGRF1Q5T601 910 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 FYB2Q5VWT5 728 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 RFWD3Q6PCD5 774 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 DTWD2Q8NBA8 298 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 CLDN23Q96B33 292 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 PRICKLE1Q96MT3 831 aaPredicted RBP16.41■□□□□ 0.22
CHD3-215ENST00000572750 SELENOOQ9BVL4 669 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 ABHD10Q9NUJ1 306 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 DNAJC17Q9NVM6 304 aaKnown RBP16.41■□□□□ 0.22
CHD3-215ENST00000572750 ARHGAP20Q9P2F6 1191 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 ADAMTS1Q9UHI8 967 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 STOML2Q9UJZ1 356 aa16.41■□□□□ 0.22
CHD3-215ENST00000572750 BZW2Q9Y6E2 419 aaKnown RBP16.41■□□□□ 0.22
CHD3-215ENST00000572750 TCRBV5S1A1TA0A578 114 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 NCAM2O15394 837 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 PENKP01210 267 aaPredicted RBP16.4■□□□□ 0.22
CHD3-215ENST00000572750 HNRNPH3P31942 346 aaKnown RBP16.4■□□□□ 0.22
CHD3-215ENST00000572750 CCR1P32246 355 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 EIF2DP41214 584 aaKnown RBP16.4■□□□□ 0.22
CHD3-215ENST00000572750 RPS9P46781 194 aaKnown RBP16.4■□□□□ 0.22
CHD3-215ENST00000572750 ADKP55263 362 aaKnown RBP16.4■□□□□ 0.22
CHD3-215ENST00000572750 ATP11AP98196 1134 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 TBX2Q13207 712 aaPredicted RBP16.4■□□□□ 0.22
CHD3-215ENST00000572750 ST3GAL2Q16842 350 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 CDO1Q16878 200 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 RSPO4Q2I0M5 234 aaPredicted RBP16.4■□□□□ 0.22
CHD3-215ENST00000572750 SLC25A52Q3SY17 297 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 WDR59Q6PJI9 974 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 PHTF2Q8N3S3 785 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 RNF34Q969K3 372 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 NT5C3BQ969T7 300 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 MYEOVQ96EZ4 313 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 MCEEQ96PE7 176 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 CHRDQ9H2X0 955 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 ARHGEF4Q9NR80 690 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 RRN3Q9NYV6 651 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 ATG2BQ96BY7 2078 aa16.4■□□□□ 0.22
CHD3-215ENST00000572750 A0A087X0T9 212 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 ANTXRLA6NF34 631 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 C2CD4BA6NLJ0 364 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.39■□□□□ 0.21
CHD3-215ENST00000572750 GFRA2O00451 464 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 RNF40O75150 1001 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 KAT7O95251 611 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 FTLP02792 175 aaPredicted RBP16.39■□□□□ 0.21
CHD3-215ENST00000572750 CYBBP04839 570 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 FAM228BP0C875 321 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 KRT3P12035 628 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 DRD1P21728 446 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 HOXD9P28356 352 aaPredicted RBP16.39■□□□□ 0.21
CHD3-215ENST00000572750 SDC4P31431 198 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 RFC1P35251 1148 aaPredicted RBP16.39■□□□□ 0.21
CHD3-215ENST00000572750 GGCXP38435 758 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 SEC13P55735 322 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 DEUP1Q05D60 604 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 MTAPQ13126 283 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 GAS6Q14393 721 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 ARID5BQ14865 1188 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 C15orf59Q2T9L4 293 aaPredicted RBP16.39■□□□□ 0.21
CHD3-215ENST00000572750 RAB6CQ53S08 254 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 DGKKQ5KSL6 1271 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 RAP1GAP2Q684P5 730 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 GRAMD4Q6IC98 578 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 PPP1R2P3Q6NXS1 205 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 PKN3Q6P5Z2 889 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 ARCQ7LC44 396 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 VPS36Q86VN1 386 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 CHSY1Q86X52 802 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 OR8K1Q8NGG5 319 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 DDI1Q8WTU0 396 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 RXFP2Q8WXD0 754 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 EXOC4Q96A65 974 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 ZNF653Q96CK0 615 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 MRFAP1L1Q96HT8 127 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 BTN2A3PQ96KV6 586 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 XPO6Q96QU8 1125 aaKnown RBP16.39■□□□□ 0.21
CHD3-215ENST00000572750 PNKPQ96T60 521 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 ANP32EQ9BTT0 268 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 RAB6CQ9H0N0 254 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 SPATA6Q9NWH7 488 aaPredicted RBP16.39■□□□□ 0.21
CHD3-215ENST00000572750 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHD3-215ENST00000572750 DEC1Q9P2X7 70 aa16.39■□□□□ 0.21
CHD3-215ENST00000572750 SETXQ7Z333 2677 aaKnown RBP16.39■□□□□ 0.21
CHD3-215ENST00000572750 KCNU1A8MYU2 1149 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 RTN2O75298 545 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 APODP05090 189 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 SLC2A3P11169 496 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 GZMAP12544 262 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 PDGFRAP16234 1089 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 ABCB4P21439 1286 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 RDXP35241 583 aaKnown RBP16.38■□□□□ 0.21
CHD3-215ENST00000572750 EIF4A3P38919 411 aaKnown RBP16.38■□□□□ 0.21
CHD3-215ENST00000572750 MAGEA9P43362 315 aa16.38■□□□□ 0.21
CHD3-215ENST00000572750 RPL7AP62424 266 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms