RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CHFRQ96EP1 664 aa14.35□□□□□ -0.11
RPAIN-209ENST00000571558 SPATA17Q96L03 361 aa14.35□□□□□ -0.11
RPAIN-209ENST00000571558 HHIPQ96QV1 700 aa14.35□□□□□ -0.11
RPAIN-209ENST00000571558 EBF3Q9H4W6 596 aa14.35□□□□□ -0.11
RPAIN-209ENST00000571558 SLC32A1Q9H598 525 aa14.35□□□□□ -0.11
RPAIN-209ENST00000571558 ST7Q9NRC1 585 aa14.35□□□□□ -0.11
RPAIN-209ENST00000571558 TDP1Q9NUW8 608 aa14.35□□□□□ -0.11
RPAIN-209ENST00000571558 CNOT8Q9UFF9 292 aaKnown RBP14.35□□□□□ -0.11
RPAIN-209ENST00000571558 CHORDC1Q9UHD1 332 aaPredicted RBP14.35□□□□□ -0.11
RPAIN-209ENST00000571558 STRIP2Q9ULQ0 834 aa14.35□□□□□ -0.11
RPAIN-209ENST00000571558 LHX6Q9UPM6 363 aa14.35□□□□□ -0.11
RPAIN-209ENST00000571558 USP3Q9Y6I4 520 aa14.35□□□□□ -0.11
RPAIN-209ENST00000571558 ITPR1Q14643 2758 aa14.35□□□□□ -0.11
RPAIN-209ENST00000571558 PIK3R2O00459 728 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 CDX4O14627 284 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-209ENST00000571558 TRIM66O15016 1216 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 MTA2O94776 668 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 EGFP01133 1207 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 ATF6P18850 670 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 GBP1P32455 592 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 RDXP35241 583 aaKnown RBP14.34□□□□□ -0.11
RPAIN-209ENST00000571558 RING1Q06587 406 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 KIF5AQ12840 1032 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 LMAN2Q12907 356 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 MAMLD1Q13495 774 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 DMC1Q14565 340 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 MGAT5BQ3V5L5 792 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 OLFML1Q6UWY5 402 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 FAM183BPQ6ZVS7 135 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 BHLHA9Q7RTU4 235 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 SCN4BQ8IWT1 228 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 SCUBE3Q8IX30 993 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 SCML4Q8N228 414 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 TXLNBQ8N3L3 684 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 C3orf20Q8ND61 904 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 IPO4Q8TEX9 1081 aaKnown RBP14.34□□□□□ -0.11
RPAIN-209ENST00000571558 PIWIL1Q96J94 861 aaKnown RBP14.34□□□□□ -0.11
RPAIN-209ENST00000571558 CEP295NLQ96MC4 621 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 IL37Q9NZH6 218 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 EVLQ9UI08 416 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-209ENST00000571558 MSRB2Q9Y3D2 182 aa14.34□□□□□ -0.11
RPAIN-209ENST00000571558 FAM92AA1XBS5 289 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 OTOL1A6NHN0 477 aaPredicted RBP14.33□□□□□ -0.11
RPAIN-209ENST00000571558 SPINK2P20155 84 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 SCNN1AP37088 669 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 DPP6P42658 865 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 TKTL1P51854 596 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 SLC5A3P53794 718 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 HADHBP55084 474 aaKnown RBP14.33□□□□□ -0.11
RPAIN-209ENST00000571558 SNX16P57768 344 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 RPL10AP62906 217 aaKnown RBP14.33□□□□□ -0.11
RPAIN-209ENST00000571558 CYP4F8P98187 520 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 ADIGQ0VDE8 80 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 SDHAF4Q5VUM1 108 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 PM20D1Q6GTS8 502 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 PHLDB2Q86SQ0 1253 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 ZDHHC17Q8IUH5 632 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 RHOT2Q8IXI1 618 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 CPA6Q8N4T0 437 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 RPLP0P6Q8NHW5 317 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 SLC35G2Q8TBE7 412 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 CLEC4CQ8WTT0 213 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 USP13Q92995 863 aaPredicted RBP14.33□□□□□ -0.11
RPAIN-209ENST00000571558 SEPT5Q99719 369 aaPredicted RBP14.33□□□□□ -0.11
RPAIN-209ENST00000571558 TSGA10Q9BZW7 698 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 MIS12Q9H081 205 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 SYNCQ9H7C4 482 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 LZTFL1Q9NQ48 299 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 PARVAQ9NVD7 372 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 WDR35Q9P2L0 1181 aa14.33□□□□□ -0.11
RPAIN-209ENST00000571558 GOLGA6L9A6NEM1 432 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 UPK3BL1B0FP48 263 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 UPK3BL2E5RIL1 263 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 H0Y626 953 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 DCLK1O15075 740 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 CCP110O43303 1012 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 KRT86O43790 486 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 TRIM16O95361 564 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 LCP1P13796 627 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 GJA4P35212 333 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 DGKEP52429 567 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 SLC6A3Q01959 620 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 CYP2U1Q7Z449 544 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 SCAMP5Q8TAC9 235 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 ULBP1Q9BZM6 244 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 LRRC4Q9HBW1 653 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 FBRSL1Q9HCM7 1045 aaKnown RBP14.32□□□□□ -0.12
RPAIN-209ENST00000571558 OSGEPQ9NPF4 335 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 CNGB3Q9NQW8 809 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 UVRAGQ9P2Y5 699 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 MYO1AQ9UBC5 1043 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 TMEM59LQ9UK28 342 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 WDFY3Q8IZQ1 3526 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 KIF26AQ9ULI4 1882 aaPredicted RBP14.32□□□□□ -0.12
RPAIN-209ENST00000571558 FAM221BA6H8Z2 402 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 TMEM191CA6NGB0 347 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 SIGLEC16A6NMB1 481 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 FBXO21O94952 628 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 GJB6O95452 261 aa14.32□□□□□ -0.12
RPAIN-209ENST00000571558 ZBED1O96006 694 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms