RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	KRT3	P12035	628 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	CHRNB2	P17787	502 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	SLC6A11	P48066	632 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	RNASE9	P60153	205 aa	Known RBP	18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	KDSR	Q06136	332 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	EIF4EBP2	Q13542	120 aa	Predicted RBP	18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	SLC12A1	Q13621	1099 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	DMC1	Q14565	340 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	PIK3R6	Q5UE93	754 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	ACAD10	Q6JQN1	1059 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	LRRC31	Q6UY01	552 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	MMS22L	Q6ZRQ5	1243 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	AHI1	Q8N157	1196 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	ZNF513	Q8N8E2	541 aa	Predicted RBP	18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	ZBTB44	Q8NCP5	570 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	NKD2	Q969F2	451 aa	Predicted RBP	18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	WBP2	Q969T9	261 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	NPY6R	Q99463	290 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	EBF1	Q9UH73	591 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	RAB23	Q9ULC3	237 aa		18.65	■□□□□ 0.58
PKD1-238	ENST00000570150	GRAP2	O75791	330 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	HNRNPL	P14866	589 aa	Known RBP eCLIP	18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	RDX	P35241	583 aa	Known RBP	18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	PBX1	P40424	430 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	CXCR3	P49682	368 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	SULT1E1	P49888	294 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	DEUP1	Q05D60	604 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	NME3	Q13232	169 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	CDH18	Q13634	790 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.64	■□□□□ 0.57
PKD1-238	ENST00000570150		Q6ZS52	159 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	PHTF2	Q8N3S3	785 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	TSTD1	Q8NFU3	115 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	C1orf74	Q96LT6	269 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	PARVA	Q9NVD7	372 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	TMEM59L	Q9UK28	342 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	PLA2G4C	Q9UP65	541 aa		18.64	■□□□□ 0.57
PKD1-238	ENST00000570150	SIGLEC16	A6NMB1	481 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	GOLGA8S	H3BPF8	625 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	MOCS2	O96007	188 aa	Predicted RBP	18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	SERPING1	P05155	500 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	PDGFRA	P16234	1089 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	NTSR1	P30989	418 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	PTPN9	P43378	593 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	KIR2DL1	P43626	348 aa	Predicted RBP	18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	AIF1	P55008	147 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	SATB1	Q01826	763 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	STARD3	Q14849	445 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	TAF5	Q15542	800 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	C2orf27A	Q580R0	203 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	MS4A13	Q5J8X5	152 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	RNF43	Q68DV7	783 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	DNAJC24	Q6P3W2	148 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	STRADA	Q7RTN6	431 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	WDR5B	Q86VZ2	330 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	C12orf40	Q86WS4	652 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	CHSY1	Q86X52	802 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	MFN1	Q8IWA4	741 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	MAML2	Q8IZL2	1156 aa	Predicted RBP	18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	FIBIN	Q8TAL6	211 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	ADAM32	Q8TC27	787 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	HAPLN3	Q96S86	360 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	C11orf70	Q9BRQ4	267 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	XPO4	Q9C0E2	1151 aa	Known RBP	18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	HAUS4	Q9H6D7	363 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	MRPL47	Q9HD33	250 aa	Known RBP	18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	SCIN	Q9Y6U3	715 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	USP34	Q70CQ2	3546 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	MYO15A	Q9UKN7	3530 aa		18.63	■□□□□ 0.57
PKD1-238	ENST00000570150	ASL	P04424	464 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	CISD3	P0C7P0	127 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	TACR2	P21452	398 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	HOXD9	P28356	352 aa	Predicted RBP	18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	SEC13	P55735	322 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	GAS6	Q14393	721 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	CRY1	Q16526	586 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	TDRD12	Q587J7	1177 aa	Known RBP	18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	FAM133B	Q5BKY9	247 aa	Known RBP	18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	DCUN1D2	Q6PH85	259 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	MON1B	Q7L1V2	547 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	CHPF	Q8IZ52	775 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	SLC30A5	Q8TAD4	765 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	BHMT	Q93088	406 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	PIWIL1	Q96J94	861 aa	Known RBP	18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	FBRS	Q9HAH7	460 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	DONSON	Q9NYP3	566 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	PLK2	Q9NYY3	685 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	KIAA1522	Q9P206	1035 aa	Predicted RBP	18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	LCMT1	Q9UIC8	334 aa		18.62	■□□□□ 0.57
PKD1-238	ENST00000570150	DMD	P11532	3685 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150		A0A1B0GVM2	712 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	TCAF2	A6NFQ2	919 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	GFRA3	O60609	400 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	TBL1X	O60907	577 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	LILRB5	O75023	590 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	RTN2	O75298	545 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	ENDOD1	O94919	500 aa		18.61	■□□□□ 0.57
PKD1-238	ENST00000570150	KLF8	O95600	359 aa	Predicted RBP	18.61	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms