RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 NKIRAS1Q9NYS0 192 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 PSMC3IPQ9P2W1 217 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 XPO7Q9UIA9 1087 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 FBXW11Q9UKB1 542 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 STAP1Q9ULZ2 295 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 AP4E1Q9UPM8 1137 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 PCDHGA11Q9Y5H2 935 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 SCN10AQ9Y5Y9 1956 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 CENPFP49454 3210 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 A0A0A0MRY4 1105 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 GOLGA6L7A0A1B0GV03 622 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 CCT8L1PA6NM43 557 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 POC1B-GALNT4F8VUJ3 575 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 M0QYT0 321 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 CLDN5O00501 218 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 NRP1O14786 923 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PPP1R12AO14974 1030 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 NCAM2O15394 837 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SNX3O60493 162 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 MGEA5O60502 916 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 OPHN1O60890 802 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 FKTNO75072 461 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ALDH1A2O94788 518 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 FSBPO95073 299 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ZBED1O96006 694 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 CPP00450 1065 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ODC1P11926 461 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 TAC1P20366 129 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 AMPD1P23109 780 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PRKCHP24723 683 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ACAT1P24752 427 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SSTR1P30872 391 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 CYP2C18P33260 490 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ARL4AP40617 200 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 MLH1P40692 756 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ELK3P41970 407 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 MSH2P43246 934 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 CXCR3P49682 368 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 NDUFV1P49821 464 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SULT1E1P49888 294 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SCNN1GP51170 649 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 AFF1P51825 1210 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 TKTL1P51854 596 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ATXN1P54253 815 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 MAP3K7CLP57077 242 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SARNPP82979 210 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 IL9RQ01113 521 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 GBE1Q04446 702 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 GAD2Q05329 585 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SLC18A2Q05940 514 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ZNF33AQ06730 810 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 GRIK3Q13003 919 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 IFT88Q13099 833 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ITGA7Q13683 1181 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 DPYSQ14117 519 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PRKD1Q15139 912 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 MAPRE1Q15691 268 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PKN2Q16513 984 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PARP6Q2NL67 630 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 TSNAXIP1Q2TAA8 658 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 BBS9Q3SYG4 887 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 DCAF6Q58WW2 860 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PPP6R3Q5H9R7 873 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 MDH1BQ5I0G3 518 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SYPL2Q5VXT5 272 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 NCBP2-AS2Q69YL0 99 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SH2D5Q6ZV89 423 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 BHLHA9Q7RTU4 235 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ZC3H18Q86VM9 953 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ECHDC2Q86YB7 292 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 CCNJLQ8IV13 435 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 IGDCC3Q8IVU1 814 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 LRRC34Q8IZ02 419 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SIX6OS1Q8N1H7 587 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 C3orf58Q8NDZ4 430 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 FBF1Q8TES7 1133 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 RNF139Q8WU17 664 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ZNF296Q8WUU4 475 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 DCAKDQ8WVC6 231 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 TFB1MQ8WVM0 346 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SLC44A1Q8WWI5 657 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 HTR3CQ8WXA8 447 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PPM1EQ8WY54 764 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 RSPH1Q8WYR4 309 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 CCT6BQ92526 530 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 LPPQ93052 612 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SMARCD1Q96GM5 515 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PCED1BQ96HM7 432 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 CABS1Q96KC9 395 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SUSD3Q96L08 255 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SIGLEC10Q96LC7 697 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 SPATA13Q96N96 652 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 ADAM2Q99965 735 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 FERMT1Q9BQL6 677 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 PLCD4Q9BRC7 762 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 WDR83Q9BRX9 315 aaKnown RBP5.56□□□□□ -1.52
SF3B3-213ENST00000569687 MED10Q9BTT4 135 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 TRIM62Q9BVG3 475 aa5.56□□□□□ -1.52
SF3B3-213ENST00000569687 MAGEB5Q9BZ81 275 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms