RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 FAM204AQ9H8W3 233 aa14.34□□□□□ -0.11
HERPUD1-218ENST00000569569 TMEM51Q9NW97 253 aa14.34□□□□□ -0.11
HERPUD1-218ENST00000569569 DDIT4Q9NX09 232 aa14.34□□□□□ -0.11
HERPUD1-218ENST00000569569 EBF1Q9UH73 591 aa14.34□□□□□ -0.11
HERPUD1-218ENST00000569569 CLEC4EQ9ULY5 219 aa14.34□□□□□ -0.11
HERPUD1-218ENST00000569569 STAP1Q9ULZ2 295 aa14.34□□□□□ -0.11
HERPUD1-218ENST00000569569 CEP192Q8TEP8 1941 aa14.34□□□□□ -0.11
HERPUD1-218ENST00000569569 THADAQ6YHU6 1953 aa14.34□□□□□ -0.11
HERPUD1-218ENST00000569569 DOCK4Q8N1I0 1966 aa14.34□□□□□ -0.11
HERPUD1-218ENST00000569569 EP300Q09472 2414 aaPredicted RBP14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 SYNJ2BP-COX16A0A087WUM0 186 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 TYW5A2RUC4 315 aaKnown RBP14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 KCNU1A8MYU2 1149 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 M0QYT0 321 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 SGK1O00141 431 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 TBL1XO60907 577 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 APBB3O95704 486 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 HNRNPLP14866 589 aaKnown RBP eCLIP14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 ABCB4P21439 1286 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 MMP8P22894 467 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 NTSR1P30989 418 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 CCR1P32246 355 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 PXNP49023 591 aaPredicted RBP14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 MTA1Q13330 715 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 E2F5Q15329 346 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 SDE2Q6IQ49 451 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 TMEM92Q6UXU6 159 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 ARCQ7LC44 396 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 IRF2BP2Q7Z5L9 587 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 ANKS1BQ7Z6G8 1248 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 ZNF557Q8N988 423 aaPredicted RBP14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 SUMF1Q8NBK3 374 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 TSTD1Q8NFU3 115 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 SLC30A5Q8TAD4 765 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 UCMAQ8WVF2 138 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 RNF34Q969K3 372 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 NT5C3BQ969T7 300 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 PCDHB18PQ96TA0 734 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 NPY6RQ99463 290 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 NUP58Q9BVL2 599 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 EPC1Q9H2F5 836 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 POLMQ9NP87 494 aaPredicted RBP14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 ZDHHC4Q9NPG8 344 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 COX16Q9P0S2 106 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 HCN2Q9UL51 889 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 OTOGLQ3ZCN5 2332 aa14.33□□□□□ -0.12
HERPUD1-218ENST00000569569 CKAP5Q14008 2032 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 FAM170AA1A519 330 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 GOLGA8SH3BPF8 625 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 NPC1O15118 1278 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 AXIN1O15169 862 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 HRO43593 1189 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 TIMM44O43615 452 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 ADAM23O75077 832 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 ALDH1A2O94788 518 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 F9P00740 461 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 NSFP46459 744 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 SGSHP51688 502 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 CENPCQ03188 943 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 NME3Q13232 169 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 GEN1Q17RS7 908 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 CLEC16AQ2KHT3 1053 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 SLC25A52Q3SY17 297 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 FIGNQ5HY92 759 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 MS4A13Q5J8X5 152 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 EGFLAMQ63HQ2 1017 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 LRSAM1Q6UWE0 723 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 MMS22LQ6ZRQ5 1243 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 CHPFQ8IZ52 775 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 HJURPQ8NCD3 748 aaPredicted RBP14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 PGAP3Q96FM1 320 aaPredicted RBP14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 C11orf70Q9BRQ4 267 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 NUCKS1Q9H1E3 243 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 SEPT11Q9NVA2 429 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 AIPL1Q9NZN9 384 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 XPO7Q9UIA9 1087 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 TMEM59LQ9UK28 342 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 PLXND1Q9Y4D7 1925 aa14.32□□□□□ -0.12
HERPUD1-218ENST00000569569 NUP205Q92621 2012 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 LRRC53A6NM62 1247 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 CALB1P05937 261 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 TACR2P21452 398 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 TNFAIP3P21580 790 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 HLA-FP30511 346 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 FLT3P36888 993 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 SULT1E1P49888 294 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 SIM2Q14190 667 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 EIF4HQ15056 248 aaKnown RBP14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 SFMBT2Q5VUG0 894 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 RAP1GAP2Q684P5 730 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 RNF43Q68DV7 783 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 SND1Q7KZF4 910 aaKnown RBP eCLIP14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 RASSF3Q86WH2 238 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 CHSY1Q86X52 802 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 PHF13Q86YI8 300 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 CCDC117Q8IWD4 279 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 FIBINQ8TAL6 211 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 WFIKKN2Q8TEU8 576 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 GAB3Q8WWW8 586 aa14.31□□□□□ -0.12
HERPUD1-218ENST00000569569 ACOX2Q99424 681 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms