RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 SFSWAPQ12872 951 aaKnown RBP6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 SPIDRQ14159 915 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 CDKN3Q16667 212 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 BMT2Q1RMZ1 405 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 SV2CQ496J9 727 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 TDRD10Q5VZ19 366 aaKnown RBP6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 TMEM215Q68D42 235 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 ZNF776Q68DI1 518 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 TCTN3Q6NUS6 607 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 ZCCHC8Q6NZY4 707 aaKnown RBP6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 GUSBP11Q6P575 273 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 FAM177A1Q8N128 213 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 PDZD8Q8NEN9 1154 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 SPATA3Q8NHX4 192 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 GPBAR1Q8TDU6 330 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 APOBEC4Q8WW27 367 aaKnown RBP6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 SORCS1Q8WY21 1168 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 C8orf48Q96LL4 319 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 C5orf34Q96MH7 638 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 B3GNT4Q9C0J1 378 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 PRSS16Q9NQE7 514 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 KMT5AQ9NQR1 393 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 PLK2Q9NYY3 685 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 ORC3Q9UBD5 711 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 FZD4Q9ULV1 537 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 MAP4K5Q9Y4K4 846 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 CPED1A4D0V7 1026 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 ZNF891A8MT65 544 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 TCP11X1B4DZS4 312 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 SLC27A2O14975 620 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 CNTN5O94779 1100 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 JMJD7P0C870 316 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 IRF1P10914 325 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 HGFP14210 728 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 DRD2P14416 443 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 BDNFP23560 247 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 ITGB7P26010 798 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 PCSK1P29120 753 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 NUDT1P36639 197 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 SRSF11Q05519 484 aaKnown RBP6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 STRN3Q13033 797 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 MRPL49Q13405 166 aaKnown RBP6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 SEPT6Q14141 434 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 TMEM132DQ14C87 1099 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 SMTNL2Q2TAL5 461 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 SP5Q6BEB4 398 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 PRR7Q8TB68 274 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 GANCQ8TET4 914 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 BHMTQ93088 406 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 MYLPFQ96A32 169 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 IFT43Q96FT9 208 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 SLC26A6Q9BXS9 759 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 CIPCQ9C0C6 399 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 STRADBQ9C0K7 418 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 RSPH9Q9H1X1 276 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 NEUROG2Q9H2A3 272 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 C17orf75Q9HAS0 396 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 PREBQ9HCU5 417 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 FOXJ2Q9P0K8 574 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 ARHGAP20Q9P2F6 1191 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 PISDQ9UG56 409 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 SERGEFQ9UGK8 458 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 LSM7Q9UK45 103 aaKnown RBP6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 L1RE1Q9UN81 338 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 DMTF1Q9Y222 760 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 SLC5A6Q9Y289 635 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 C2CD2Q9Y426 696 aa6.96□□□□□ -1.3
HERPUD1-217ENST00000569429 A0A1W2PP55 124 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 F8VP50 259 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 CAPN5O15484 640 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 JAK2O60674 1132 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 MED24O75448 989 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 ZDHHC11BP0C7U3 371 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 IFNAR1P17181 557 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 NR1D1P20393 614 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 CHMLP26374 656 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 CCKBRP32239 447 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 PNPLA4P41247 253 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 MATR3P43243 847 aaKnown RBP eCLIP6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 LEPRP48357 1165 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 LHX1P48742 406 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 ARID5AQ03989 594 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 PDE4CQ08493 712 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 KCNMA1Q12791 1236 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 STAT4Q14765 748 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 MAPRE1Q15691 268 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 ECM1Q16610 540 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 PERM1Q5SV97 790 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 FYB2Q5VWT5 728 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 CRTC1Q6UUV9 634 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 GDF7Q7Z4P5 450 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 B3GNT8Q7Z7M8 397 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 PRPF39Q86UA1 669 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 OSTM1Q86WC4 334 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 TP53INP2Q8IXH6 220 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 DAW1Q8N136 415 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 ZNF276Q8N554 614 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 ZNF366Q8N895 744 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 NKD1Q969G9 470 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 TMEM159Q96B96 161 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms