RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 CAPN9O14815 690 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 IKBKBO14920 756 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 SPTLC2O15270 562 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 TLX3O43711 291 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 PPP6R2O75170 966 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 LDOC1O95751 146 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 HLA-DRAP01903 254 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 PLA2G2AP14555 144 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 CASP1P29466 404 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 HARS2P49590 506 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 PPP1R26Q5T8A7 1209 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 ZNF776Q68DI1 518 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 KIAA0895LQ68EN5 471 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 ZNF605Q86T29 641 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 GATAD2AQ86YP4 633 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 AHI1Q8N157 1196 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 SNIP1Q8TAD8 396 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 CNDP2Q96KP4 475 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 ARID3AQ99856 593 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 NRSN2Q9GZP1 204 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 ZSCAN16Q9H4T2 348 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 PRSS16Q9NQE7 514 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 ABCB8Q9NUT2 735 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 DMAC2Q9NW81 257 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 MGAQ8IWI9 3026 aa12.33□□□□□ -0.44
GTF3C1-209ENST00000568569 TEX51A0A1B0GUA7 166 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 A0A1W2PPC4 97 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 YKT6O15498 198 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 POLR2DO15514 142 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 IGHV4-34P06331 123 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 ATP5BP06576 529 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 ITGAVP06756 1048 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 DLDP09622 509 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 PABPC1P11940 636 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 CD58P19256 250 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 ABCB4P21439 1286 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 ACADVLP49748 655 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 YWHAGP61981 247 aaKnown RBP eCLIP12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 DNAJC3Q13217 504 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 RTP5Q14D33 572 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 TRIP4Q15650 581 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 HES3Q5TGS1 186 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 SHC4Q6S5L8 630 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 USP30Q70CQ3 517 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 ADIPOR2Q86V24 386 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 ZNF843Q8N446 348 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 SLC6A18Q96N87 628 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 NIF3L1Q9GZT8 377 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 APOBEC3GQ9HC16 384 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 GGA2Q9UJY4 613 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 SCML1Q9UN30 329 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 MTMR6Q9Y217 621 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 NCKAP1Q9Y2A7 1128 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 RAI2Q9Y5P3 530 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 ATMQ13315 3056 aa12.32□□□□□ -0.44
GTF3C1-209ENST00000568569 FAM47DPA6NHR8 397 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 CBX4O00257 560 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 CUTAO60888 179 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 NR3C1P04150 777 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 CLDN6P56747 220 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 SLC8A3P57103 927 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 SFSWAPQ12872 951 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 CUL4BQ13620 913 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 RAB41Q5JT25 222 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 CEP135Q66GS9 1140 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 MBLAC2Q68D91 279 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 FBXL19Q6PCT2 694 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 GPR155Q7Z3F1 870 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 KIAA0907Q7Z7F0 614 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 PIGZQ86VD9 579 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 SAP25Q8TEE9 199 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 GANCQ8TET4 914 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 TMA16Q96EY4 203 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 UBXN6Q9BZV1 441 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 PABPC3Q9H361 631 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 GDF3Q9NR23 364 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 OLA1Q9NTK5 396 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 FBXL12Q9NXK8 326 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 SUN2Q9UH99 717 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 FRMD4BQ9Y2L6 1034 aa12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 HBS1LQ9Y450 684 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-209ENST00000568569 MYH10P35580 1976 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 CAPN8A6NHC0 703 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 PDXKO00764 312 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 LATS1O95835 1130 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 SLFN14P0C7P3 912 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 AFMP43652 599 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 ARRB1P49407 418 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 VAMP7P51809 220 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 TKTL1P51854 596 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 GALCP54803 685 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 ILKQ13418 452 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 SHBQ15464 509 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 ZNF394Q53GI3 561 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 PRAMEF14Q5SWL7 426 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 C1orf220Q5T0J3 134 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 ADGRF1Q5T601 910 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms