RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 LRMPQ12912 555 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 PNOCQ13519 176 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 CUL2Q13617 745 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 HLA-BQ31612 363 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 MPPE1Q53F39 396 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 SGO2Q562F6 1265 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 CHST9Q7L1S5 443 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 PROSER1Q86XN7 944 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 SIX6OS1Q8N1H7 587 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 OR2T3Q8NH03 318 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 C1orf216Q8TAB5 229 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 WFDC5Q8TCV5 224 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 RNF139Q8WU17 664 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 IPO9Q96P70 1041 aaKnown RBP16.2■□□□□ 0.18
NME3-211ENST00000568561 NUP58Q9BVL2 599 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 LHX5Q9H2C1 402 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 TM7SF3Q9NS93 570 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 ABCB8Q9NUT2 735 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 NFE2L3Q9Y4A8 694 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 GOLGA8CPA6NN73 597 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 CETN3O15182 167 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 STX10O60499 249 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 ZNF202O95125 648 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 CER1O95813 267 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 CALCAP01258 141 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 LCP1P13796 627 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 RGS7P49802 495 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 MCCD1P59942 119 aaPredicted RBP16.19■□□□□ 0.18
NME3-211ENST00000568561 BST2Q10589 180 aaKnown RBP16.19■□□□□ 0.18
NME3-211ENST00000568561 CAMK2GQ13555 558 aaPredicted RBP16.19■□□□□ 0.18
NME3-211ENST00000568561 BSPRYQ5W0U4 402 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 RFWD3Q6PCD5 774 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 ADIPOR2Q86V24 386 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 MARCH9Q86YJ5 346 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 MTG2Q9H4K7 406 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 OLA1Q9NTK5 396 aaKnown RBP16.19■□□□□ 0.18
NME3-211ENST00000568561 HESX1Q9UBX0 185 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 GGA2Q9UJY4 613 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 BTBD3Q9Y2F9 522 aa16.19■□□□□ 0.18
NME3-211ENST00000568561 GOLGA6L7A0A1B0GV03 622 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 A0A1W2PQ27 194 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 A0A1W2PQ64 194 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 O00370 1275 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 ATXN1LP0C7T5 689 aaKnown RBP16.18■□□□□ 0.18
NME3-211ENST00000568561 PMS1P54277 932 aaKnown RBP16.18■□□□□ 0.18
NME3-211ENST00000568561 PTPRNQ16849 979 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 KIF19Q2TAC6 998 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 C19orf48Q6RUI8 117 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 LRSAM1Q6UWE0 723 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 MDM1Q8TC05 714 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 WFIKKN2Q8TEU8 576 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 ERCC4Q92889 916 aaPredicted RBP16.18■□□□□ 0.18
NME3-211ENST00000568561 TMA16Q96EY4 203 aaKnown RBP16.18■□□□□ 0.18
NME3-211ENST00000568561 FAXDC2Q96IV6 333 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 TMEM245Q9H330 911 aa16.18■□□□□ 0.18
NME3-211ENST00000568561 APOBEC2Q9Y235 224 aaKnown RBP16.18■□□□□ 0.18
NME3-211ENST00000568561 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.18■□□□□ 0.18
NME3-211ENST00000568561 HBS1LQ9Y450 684 aaKnown RBP16.18■□□□□ 0.18
NME3-211ENST00000568561 TRIM49BA6NDI0 452 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 KCNK3O14649 394 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 TIMM44O43615 452 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 GABBR2O75899 941 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 PABPC1P11940 636 aaKnown RBP16.17■□□□□ 0.18
NME3-211ENST00000568561 CD70P32970 193 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 PRCPP42785 496 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 DAOAP59103 153 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 RPS14P62263 151 aaKnown RBP16.17■□□□□ 0.18
NME3-211ENST00000568561 ADGRF1Q5T601 910 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 MBLAC2Q68D91 279 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 CCNI2Q6ZMN8 369 aaPredicted RBP16.17■□□□□ 0.18
NME3-211ENST00000568561 UBR7Q8N806 425 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 BAHD1Q8TBE0 780 aaPredicted RBP16.17■□□□□ 0.18
NME3-211ENST00000568561 CLEC4CQ8WTT0 213 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 TFAP2BQ92481 460 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 PRSS16Q9NQE7 514 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 TOR4AQ9NXH8 423 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 STOML2Q9UJZ1 356 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 PLA2G4CQ9UP65 541 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 SNX11Q9Y5W9 270 aa16.17■□□□□ 0.18
NME3-211ENST00000568561 SLC16A3O15427 465 aaKnown RBP16.16■□□□□ 0.18
NME3-211ENST00000568561 TBL1XO60907 577 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 FSBPO95073 299 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 SEMA4FO95754 770 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 ZNF883P0CG24 379 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 SLC6A4P31645 630 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 AFF3P51826 1226 aaKnown RBP16.16■□□□□ 0.18
NME3-211ENST00000568561 E2F5Q15329 346 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 ANKRD40Q6AI12 368 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 IL27RAQ6UWB1 636 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 GLRX5Q86SX6 157 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 AHI1Q8N157 1196 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.16■□□□□ 0.18
NME3-211ENST00000568561 RHBDD1Q8TEB9 315 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 SLC35C1Q96A29 364 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 BIRC7Q96CA5 298 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 ZSWIM1Q9BR11 485 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 TM9SF3Q9HD45 589 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 ABCC13Q9NSE7 274 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 STIM2Q9P246 746 aa16.16■□□□□ 0.18
NME3-211ENST00000568561 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms