RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 MS4A13Q5J8X5 152 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 EFHC2Q5JST6 749 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 RAP1GAP2Q684P5 730 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 TRIM68Q6AZZ1 485 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 CCAR2Q8N163 923 aaKnown RBP16.27■□□□□ 0.2
SPG7-218ENST00000568205 CPXM2Q8N436 756 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 SNRNP25Q9BV90 132 aaKnown RBP16.27■□□□□ 0.2
SPG7-218ENST00000568205 BRD9Q9H8M2 597 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 FZD10Q9ULW2 581 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 HS3ST4Q9Y661 456 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 ALG6Q9Y672 507 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 CAPN6Q9Y6Q1 641 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 ARNTLO00327 626 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 GFRA2O00451 464 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 PALMO75781 387 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 NFATC1O95644 943 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 TACR2P21452 398 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 SLC6A4P31645 630 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 CHKAP35790 457 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 GGCXP38435 758 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 VCPP55072 806 aaKnown RBP16.26■□□□□ 0.19
SPG7-218ENST00000568205 MLLT6P55198 1093 aaPredicted RBP16.26■□□□□ 0.19
SPG7-218ENST00000568205 ERMARDQ5T6L9 678 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 ACBD5Q5T8D3 534 aaPredicted RBP16.26■□□□□ 0.19
SPG7-218ENST00000568205 TXNRD3NBQ6F5E7 133 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 PSTKQ8IV42 348 aaKnown RBP16.26■□□□□ 0.19
SPG7-218ENST00000568205 ADGRG2Q8IZP9 1017 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 SYCE1Q8N0S2 351 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 GJD3Q8N144 294 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 KIAA1524Q8TCG1 905 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 IRF7Q92985 503 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 ATP2A3Q93084 1043 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 TRIM44Q96DX7 344 aaPredicted RBP16.26■□□□□ 0.19
SPG7-218ENST00000568205 PRMT1Q99873 361 aaKnown RBP16.26■□□□□ 0.19
SPG7-218ENST00000568205 SIK2Q9H0K1 926 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 OSBPL2Q9H1P3 480 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 EBF3Q9H4W6 596 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 ZWILCHQ9H900 591 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 HPS4Q9NQG7 708 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 GPATCH2LQ9NWQ4 482 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 AP4E1Q9UPM8 1137 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 SNX10Q9Y5X0 201 aa16.26■□□□□ 0.19
SPG7-218ENST00000568205 GOLGA6L9A6NEM1 432 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 USP27XA6NNY8 438 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 F5H5T6 163 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 TRDMT1O14717 391 aaKnown RBP16.25■□□□□ 0.19
SPG7-218ENST00000568205 TSPAN3O60637 253 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 CYP17A1P05093 508 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 KRT7P08729 469 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 RARAP10276 462 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 GJC1P36383 396 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 TNK2Q07912 1038 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 AUHQ13825 339 aaKnown RBP16.25■□□□□ 0.19
SPG7-218ENST00000568205 DHCR24Q15392 516 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 CA9Q16790 459 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 SMTNL2Q2TAL5 461 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 KCNT1Q5JUK3 1230 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 LY6G5CQ5SRR4 150 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 LRRC38Q5VT99 294 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 RFWD3Q6PCD5 774 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 C14orf80Q86SX3 495 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 RNF135Q8IUD6 432 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 LGI2Q8N0V4 545 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 CPA6Q8N4T0 437 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 TEKT4Q8WW24 435 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 C1orf74Q96LT6 269 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 NECAB3Q96P71 396 aaPredicted RBP16.25■□□□□ 0.19
SPG7-218ENST00000568205 MAGEB5Q9BZ81 275 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 IRX2Q9BZI1 471 aaPredicted RBP16.25■□□□□ 0.19
SPG7-218ENST00000568205 SPHK2Q9NRA0 654 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 SORCS3Q9UPU3 1222 aa16.25■□□□□ 0.19
SPG7-218ENST00000568205 HELZP42694 1942 aaKnown RBP16.25■□□□□ 0.19
SPG7-218ENST00000568205 NARSO43776 548 aaKnown RBP16.24■□□□□ 0.19
SPG7-218ENST00000568205 ADH1CP00326 375 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 SRFP11831 508 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 NRG1Q02297 640 aaPredicted RBP16.24■□□□□ 0.19
SPG7-218ENST00000568205 RUNX3Q13761 415 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 FBXL22Q6P050 247 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 RHBDF2Q6PJF5 856 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 TPGS1Q6ZTW0 290 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 POLNQ7Z5Q5 900 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 TMEM25Q86YD3 366 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 RHOT1Q8IXI2 618 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 ZNF683Q8IZ20 524 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 PYROXD2Q8N2H3 581 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 HJURPQ8NCD3 748 aaPredicted RBP16.24■□□□□ 0.19
SPG7-218ENST00000568205 HSPH1Q92598 858 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 DNASE1L2Q92874 299 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 CD101Q93033 1021 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 MYEOVQ96EZ4 313 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 PRICKLE1Q96MT3 831 aaPredicted RBP16.24■□□□□ 0.19
SPG7-218ENST00000568205 ALS2CR12Q96Q35 445 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 DHX35Q9H5Z1 703 aaKnown RBP16.24■□□□□ 0.19
SPG7-218ENST00000568205 ECT2Q9H8V3 914 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 CD320Q9NPF0 282 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 TRPV5Q9NQA5 729 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 SLC2A4RGQ9NR83 387 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 KCND1Q9NSA2 647 aa16.24■□□□□ 0.19
SPG7-218ENST00000568205 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.24■□□□□ 0.19
SPG7-218ENST00000568205 MARK1Q9P0L2 795 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms