RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	NXPH1	P58417	271 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	GPSM2	P81274	684 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	ITIH3	Q06033	890 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	LRMP	Q12912	555 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	FOXF2	Q12947	444 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	HNRNPA0	Q13151	305 aa	Known RBP	5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	OS9	Q13438	667 aa	Predicted RBP	5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	CDC37	Q16543	378 aa	Predicted RBP	5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	UAP1L1	Q3KQV9	507 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	CD300E	Q496F6	205 aa	Predicted RBP	5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	ANO6	Q4KMQ2	910 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	BEND6	Q5SZJ8	279 aa	Predicted RBP	5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	EMC10	Q5UCC4	262 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	KAZN	Q674X7	775 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	ANKRD44	Q8N8A2	993 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	C1orf131	Q8NDD1	294 aa	Known RBP	5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	SLC17A8	Q8NDX2	589 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	MYCBPAP	Q8TBZ2	947 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	RPGRIP1	Q96KN7	1286 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	TRIB1	Q96RU8	372 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	OSBPL9	Q96SU4	736 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	BAG1	Q99933	345 aa	Predicted RBP	5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	IMPG2	Q9BZV3	1241 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	ACTR5	Q9H9F9	607 aa	Predicted RBP	5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	MYO1A	Q9UBC5	1043 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	ODF2L	Q9ULJ1	636 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	POLH	Q9Y253	713 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	HTT	P42858	3142 aa		5.28	□□□□□ -1.56
CBFB-208	ENST00000567947	FOCAD	Q5VW36	1801 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	SALL1	Q9NSC2	1324 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	COL2A1	P02458	1487 aa	Predicted RBP	5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	GOLGA6L7	A0A1B0GV03	622 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	GOLGA6L4	A6NEF3	574 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	PRSS29P	A6NIE9	313 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	ADM5	C9JUS6	153 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	TOR1B	O14657	336 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	SLC16A6	O15403	523 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	AHCYL1	O43865	530 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	ECE2	O60344	883 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	UFL1	O94874	794 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	GNAI3	P08754	354 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	PPP3CB	P16298	524 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	SYT1	P21579	422 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	FGFR2	P21802	821 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	ITPKB	P27987	946 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	HSPA4	P34932	840 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	GMPS	P49915	693 aa	Predicted RBP	5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	SH3BGR	P55822	239 aa	Predicted RBP	5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	PROK1	P58294	105 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	PTPN21	Q16825	1174 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	CCDC57	Q2TAC2	916 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	KHDC1	Q4VXA5	237 aa	Known RBP	5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	TMEM240	Q5SV17	173 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	TRIM65	Q6PJ69	517 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	OLFM4	Q6UX06	510 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	CRELD2	Q6UXH1	353 aa	Predicted RBP	5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	ARMC9	Q7Z3E5	817 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	SRGAP1	Q7Z6B7	1085 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	FAM90A1	Q86YD7	464 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	MFN1	Q8IWA4	741 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	SRRM1	Q8IYB3	904 aa	Known RBP	5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	CEP57L1	Q8IYX8	460 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	CNTROB	Q8N137	903 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	PRR18	Q8N4B5	295 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	MIPOL1	Q8TD10	442 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	AFAP1L1	Q8TED9	768 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	ZFAND2B	Q8WV99	257 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	ANKS1A	Q92625	1134 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	SAAL1	Q96ER3	474 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	FBXL20	Q96IG2	436 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	SMO	Q99835	787 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	VRK1	Q99986	396 aa	Predicted RBP	5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	PARD6B	Q9BYG5	372 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	GPR108	Q9NPR9	543 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	PDRG1	Q9NUG6	133 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	CHCHD3	Q9NX63	227 aa	Known RBP	5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	CFAP97	Q9P2B7	532 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	CFAP45	Q9UL16	551 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	SMC3	Q9UQE7	1217 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	EXOC6B	Q9Y2D4	811 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	MAST2	Q6P0Q8	1798 aa		5.27	□□□□□ -1.57
CBFB-208	ENST00000567947	DOCK2	Q92608	1830 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	TARSL2	A2RTX5	802 aa	Known RBP	5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	BECN2	A8MW95	431 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	PSMD14	O00487	310 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	IKBKB	O14920	756 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	STX10	O60499	249 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	KIN	O60870	393 aa	Known RBP	5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	NEBL	O76041	1014 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	KIAA0754	O94854	1291 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	PDE8B	O95263	885 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	FES	P07332	822 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	ELFN1	P0C7U0	828 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	PRDX5	P30044	214 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	NPTX2	P47972	431 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	RFX5	P48382	616 aa	Predicted RBP	5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	FNTA	P49354	379 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	RPS6KA3	P51812	740 aa		5.26	□□□□□ -1.57
CBFB-208	ENST00000567947	CHRND	Q07001	517 aa		5.26	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms