RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SLC35F5Q8WV83 523 aa19.38■□□□□ 0.69
LINC01238-205ENST00000567549 GPR174Q9BXC1 333 aa19.38■□□□□ 0.69
LINC01238-205ENST00000567549 MKRN2Q9H000 416 aaKnown RBP19.38■□□□□ 0.69
LINC01238-205ENST00000567549 SFMBT1Q9UHJ3 866 aa19.38■□□□□ 0.69
LINC01238-205ENST00000567549 GGA2Q9UJY4 613 aa19.38■□□□□ 0.69
LINC01238-205ENST00000567549 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.38■□□□□ 0.69
LINC01238-205ENST00000567549 NEUROG3Q9Y4Z2 214 aa19.38■□□□□ 0.69
LINC01238-205ENST00000567549 KRT37O76014 449 aa19.37■□□□□ 0.69
LINC01238-205ENST00000567549 PABPC1P11940 636 aaKnown RBP19.37■□□□□ 0.69
LINC01238-205ENST00000567549 PMS1P54277 932 aaKnown RBP19.37■□□□□ 0.69
LINC01238-205ENST00000567549 CAMK2GQ13555 558 aaPredicted RBP19.37■□□□□ 0.69
LINC01238-205ENST00000567549 MEA1Q16626 185 aa19.37■□□□□ 0.69
LINC01238-205ENST00000567549 PKDCCQ504Y2 493 aa19.37■□□□□ 0.69
LINC01238-205ENST00000567549 CHST9Q7L1S5 443 aa19.37■□□□□ 0.69
LINC01238-205ENST00000567549 UBR7Q8N806 425 aa19.37■□□□□ 0.69
LINC01238-205ENST00000567549 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.37■□□□□ 0.69
LINC01238-205ENST00000567549 LHX5Q9H2C1 402 aa19.37■□□□□ 0.69
LINC01238-205ENST00000567549 SCML1Q9UN30 329 aa19.37■□□□□ 0.69
LINC01238-205ENST00000567549 CACNA1EQ15878 2313 aa19.37■□□□□ 0.69
LINC01238-205ENST00000567549 KMT2BQ9UMN6 2715 aaPredicted RBP19.36■□□□□ 0.69
LINC01238-205ENST00000567549 PCDH15Q96QU1 1955 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 ADAMTS9Q9P2N4 1935 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 METTL12A8MUP2 240 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 TULP2O00295 520 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 TSPAN3O60637 253 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 RNASEH1O60930 286 aaKnown RBP19.36■□□□□ 0.69
LINC01238-205ENST00000567549 MOCS3O95396 460 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 DNTTP04053 509 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 ASLP04424 464 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 DLDP09622 509 aaKnown RBP19.36■□□□□ 0.69
LINC01238-205ENST00000567549 TBX4P57082 545 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 TEAD4Q15561 434 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 SMYD5Q6GMV2 418 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 KLHL10Q6JEL2 608 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 ENOSF1Q7L5Y1 443 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 BHLHA9Q7RTU4 235 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 RBBP8NLQ8NC74 664 aaPredicted RBP19.36■□□□□ 0.69
LINC01238-205ENST00000567549 HJURPQ8NCD3 748 aaPredicted RBP19.36■□□□□ 0.69
LINC01238-205ENST00000567549 ERLEC1Q96DZ1 483 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 SCNM1Q9BWG6 230 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 MIR1-1HGQ9H1L0 117 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 SLC6A17Q9H1V8 727 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 ABCB8Q9NUT2 735 aa19.36■□□□□ 0.69
LINC01238-205ENST00000567549 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.36■□□□□ 0.69
LINC01238-205ENST00000567549 CAPN9O14815 690 aa19.35■□□□□ 0.69
LINC01238-205ENST00000567549 BCAT2O15382 392 aaPredicted RBP19.35■□□□□ 0.69
LINC01238-205ENST00000567549 ZNF883P0CG24 379 aa19.35■□□□□ 0.69
LINC01238-205ENST00000567549 HLA-FP30511 346 aa19.35■□□□□ 0.69
LINC01238-205ENST00000567549 MTA1Q13330 715 aa19.35■□□□□ 0.69
LINC01238-205ENST00000567549 DCAF12L1Q5VU92 463 aa19.35■□□□□ 0.69
LINC01238-205ENST00000567549 MFN1Q8IWA4 741 aa19.35■□□□□ 0.69
LINC01238-205ENST00000567549 NELFBQ8WX92 580 aa19.35■□□□□ 0.69
LINC01238-205ENST00000567549 MAN1B1Q9UKM7 699 aa19.35■□□□□ 0.69
LINC01238-205ENST00000567549 NCKAP1Q9Y2A7 1128 aa19.35■□□□□ 0.69
LINC01238-205ENST00000567549 TLR6Q9Y2C9 796 aa19.35■□□□□ 0.69
LINC01238-205ENST00000567549 ACSL4O60488 711 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 IGLV3-27P01718 113 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 APOEP02649 317 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 AFPP02771 609 aaKnown RBP19.34■□□□□ 0.69
LINC01238-205ENST00000567549 PRKCHP24723 683 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 MATKP42679 507 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 RGS7P49802 495 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 COPAP53621 1224 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 MARSP56192 900 aaKnown RBP19.34■□□□□ 0.69
LINC01238-205ENST00000567549 GRIK2Q13002 908 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 PAK1Q13153 545 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 SUZ12Q15022 739 aaKnown RBP19.34■□□□□ 0.69
LINC01238-205ENST00000567549 MBLAC2Q68D91 279 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 TTI2Q6NXR4 508 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 PMF1Q6P1K2 205 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 BEND5Q7L4P6 421 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 KDF1Q8NAX2 398 aaPredicted RBP19.34■□□□□ 0.69
LINC01238-205ENST00000567549 EHBP1Q8NDI1 1231 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 STK32AQ8WU08 396 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 NDRG1Q92597 394 aaKnown RBP19.34■□□□□ 0.69
LINC01238-205ENST00000567549 FAM149B1Q96BN6 582 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 BTBD1Q9H0C5 482 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 SGK2Q9HBY8 427 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 ST7Q9NRC1 585 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 SLC12A6Q9UHW9 1150 aa19.34■□□□□ 0.69
LINC01238-205ENST00000567549 APOBEC2Q9Y235 224 aaKnown RBP19.34■□□□□ 0.69
LINC01238-205ENST00000567549 MSI1O43347 362 aaKnown RBP19.33■□□□□ 0.68
LINC01238-205ENST00000567549 TBL1XO60907 577 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 KRT5P13647 590 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 BRD2P25440 801 aaKnown RBP19.33■□□□□ 0.68
LINC01238-205ENST00000567549 AFF3P51826 1226 aaKnown RBP19.33■□□□□ 0.68
LINC01238-205ENST00000567549 SNX16P57768 344 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 KCNH2Q12809 1159 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 CDH18Q13634 790 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 TRIP6Q15654 476 aaKnown RBP19.33■□□□□ 0.68
LINC01238-205ENST00000567549 PIK3R6Q5UE93 754 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 ZNF776Q68DI1 518 aaPredicted RBP19.33■□□□□ 0.68
LINC01238-205ENST00000567549 KIAA0907Q7Z7F0 614 aaPredicted RBP19.33■□□□□ 0.68
LINC01238-205ENST00000567549 NAXDQ8IW45 347 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 ZCCHC9Q8N567 271 aaKnown RBP19.33■□□□□ 0.68
LINC01238-205ENST00000567549 KDM1BQ8NB78 822 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 TFAP2BQ92481 460 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 SKA1Q96BD8 255 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 MED15Q96RN5 788 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 PPP1R9BQ96SB3 815 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms