RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 SARNPP82979 210 aaKnown RBP24.02■■□□□ 1.44
LINC00543-201ENST00000567234 GAD2Q05329 585 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 NME3Q13232 169 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 CLLU1OSQ5K130 101 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 KCNT2Q6UVM3 1135 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 OR10T2Q8NGX3 314 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 MDM1Q8TC05 714 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 HASPINQ8TF76 798 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 WDR6Q9NNW5 1121 aaKnown RBP24.02■■□□□ 1.44
LINC00543-201ENST00000567234 FBXW11Q9UKB1 542 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 ANP32DO95626 131 aa24.01■■□□□ 1.43
LINC00543-201ENST00000567234 NCAM1P13591 858 aa24.01■■□□□ 1.43
LINC00543-201ENST00000567234 ATP2A2P16615 1042 aaKnown RBP24.01■■□□□ 1.43
LINC00543-201ENST00000567234 HCAR3P49019 387 aa24.01■■□□□ 1.43
LINC00543-201ENST00000567234 NRLP54845 237 aa24.01■■□□□ 1.43
LINC00543-201ENST00000567234 YWHAHQ04917 246 aaPredicted RBP24.01■■□□□ 1.43
LINC00543-201ENST00000567234 MSS51Q4VC12 460 aa24.01■■□□□ 1.43
LINC00543-201ENST00000567234 C4orf50Q6ZRC1 276 aa24.01■■□□□ 1.43
LINC00543-201ENST00000567234 MAML1Q92585 1016 aa24.01■■□□□ 1.43
LINC00543-201ENST00000567234 INTS9Q9NV88 658 aaKnown RBP24.01■■□□□ 1.43
LINC00543-201ENST00000567234 TMLHEQ9NVH6 421 aa24.01■■□□□ 1.43
LINC00543-201ENST00000567234 CTNNAL1Q9UBT7 734 aa24.01■■□□□ 1.43
LINC00543-201ENST00000567234 CLUHO75153 1309 aa24.01■■□□□ 1.43
LINC00543-201ENST00000567234 ITGB1P05556 798 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 NQO1P15559 274 aaKnown RBP24■■□□□ 1.43
LINC00543-201ENST00000567234 SELPP16109 830 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 GPX6P59796 221 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 PAFAH1B3Q15102 231 aaKnown RBP24■■□□□ 1.43
LINC00543-201ENST00000567234 ARL13BQ3SXY8 428 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 LRRC8DQ7L1W4 858 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 LRRTM3Q86VH5 581 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 COLGALT2Q8IYK4 626 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 TFB1MQ8WVM0 346 aaKnown RBP24■■□□□ 1.43
LINC00543-201ENST00000567234 ELAC1Q9H777 363 aaKnown RBP24■■□□□ 1.43
LINC00543-201ENST00000567234 ETNK2Q9NVF9 386 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 RAD54BQ9Y620 910 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 DDHD2O94830 711 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 GCAP28676 217 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 CDK7P50613 346 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 DPYSQ14117 519 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 GALNTL6Q49A17 601 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 HEATR6Q6AI08 1181 aaKnown RBP24■■□□□ 1.43
LINC00543-201ENST00000567234 ANKMY2Q8IV38 441 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 MCUQ8NE86 351 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 FBXO36Q8NEA4 188 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 CRISPLD2Q9H0B8 497 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 TMEM161AQ9NX61 479 aa24■■□□□ 1.43
LINC00543-201ENST00000567234 SPAG6O75602 509 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 SMNDC1O75940 238 aaKnown RBP eCLIP23.99■■□□□ 1.43
LINC00543-201ENST00000567234 RABGGTBP53611 331 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 SEMA3BQ13214 749 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 BFSP2Q13515 415 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 BBS9Q3SYG4 887 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 HP1BP3Q5SSJ5 553 aaPredicted RBP23.99■■□□□ 1.43
LINC00543-201ENST00000567234 ZNF280BQ86YH2 543 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 PALM2Q8IXS6 379 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 CYP4X1Q8N118 509 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 ZNF483Q8TF39 744 aaPredicted RBP23.99■■□□□ 1.43
LINC00543-201ENST00000567234 ARMC5Q96C12 935 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 FERMT1Q9BQL6 677 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 RHOBTB2Q9BYZ6 727 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 RABGEF1Q9UJ41 708 aa23.99■■□□□ 1.43
LINC00543-201ENST00000567234 SYNJ2BP-COX16A0A087WUM0 186 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 EEF2KO00418 725 aaKnown RBP23.98■■□□□ 1.43
LINC00543-201ENST00000567234 OAZ2O95190 189 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 OAS1P00973 400 aaKnown RBP23.98■■□□□ 1.43
LINC00543-201ENST00000567234 CXCR3P49682 368 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 KLHL38Q2WGJ6 581 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 CAPRIN2Q6IMN6 1127 aaKnown RBP23.98■■□□□ 1.43
LINC00543-201ENST00000567234 EP400NLQ6ZTU2 488 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 C3orf62Q6ZUJ4 267 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 RFX8Q6ZV50 586 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 SPATA2LQ8IUW3 424 aaPredicted RBP23.98■■□□□ 1.43
LINC00543-201ENST00000567234 VPS52Q8N1B4 723 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 TAB3Q8N5C8 712 aaPredicted RBP23.98■■□□□ 1.43
LINC00543-201ENST00000567234 DIS3LQ8TF46 1054 aaKnown RBP23.98■■□□□ 1.43
LINC00543-201ENST00000567234 STAMBPL1Q96FJ0 436 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 WDR83Q9BRX9 315 aaKnown RBP23.98■■□□□ 1.43
LINC00543-201ENST00000567234 ACSS3Q9H6R3 686 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 TBC1D13Q9NVG8 400 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 DDIT4Q9NX09 232 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 COX16Q9P0S2 106 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 SENP1Q9P0U3 644 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 TEX264Q9Y6I9 313 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 KIAA0100Q14667 2235 aaKnown RBP23.98■■□□□ 1.43
LINC00543-201ENST00000567234 BANF1O75531 89 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 MAP3K6O95382 1288 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 TPSB2P20231 275 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 GCKP35557 465 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 ATN1P54259 1190 aaPredicted RBP23.98■■□□□ 1.43
LINC00543-201ENST00000567234 BLMHQ13867 455 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 PDK1Q15118 436 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 TPSAB1Q15661 275 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 BSPRYQ5W0U4 402 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 PDZD4Q76G19 769 aaPredicted RBP23.98■■□□□ 1.43
LINC00543-201ENST00000567234 EGFL6Q8IUX8 553 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 HTR3CQ8WXA8 447 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 TMEM209Q96SK2 561 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 COLEC11Q9BWP8 271 aa23.98■■□□□ 1.43
LINC00543-201ENST00000567234 ETNK1Q9HBU6 452 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms