RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 FDFT1P37268 417 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 ABL2P42684 1182 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 WASHC5Q12768 1159 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 TRIM32Q13049 653 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 ZRSR2Q15696 482 aaKnown RBP17.29■□□□□ 0.36
CMTM3-213ENST00000566756 CA9Q16790 459 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 MARK2Q7KZI7 788 aaKnown RBP17.29■□□□□ 0.36
CMTM3-213ENST00000566756 ARMC2Q8NEN0 867 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 CCDC110Q8TBZ0 833 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 PPP1R13LQ8WUF5 828 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 NMUR2Q9GZQ4 415 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 GPATCH2LQ9NWQ4 482 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 RCOR3Q9P2K3 495 aaPredicted RBP17.29■□□□□ 0.36
CMTM3-213ENST00000566756 STX18Q9P2W9 335 aaKnown RBP17.29■□□□□ 0.36
CMTM3-213ENST00000566756 SRRDQ9UH36 339 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 GINS2Q9Y248 185 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 ZNF189O75820 626 aaPredicted RBP17.28■□□□□ 0.36
CMTM3-213ENST00000566756 PGK1P00558 417 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 GNRH1P01148 92 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 CSH1P0DML2 217 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 CSH2P0DML3 217 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 RGS7P49802 495 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 SLC34A1Q06495 639 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 ACSBG2Q5FVE4 666 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 PSTKQ8IV42 348 aaKnown RBP17.28■□□□□ 0.36
CMTM3-213ENST00000566756 TMEM130Q8N3G9 435 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 C12orf29Q8N999 325 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 KLHDC9Q8NEP7 349 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 KIF12Q96FN5 646 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 ZNF333Q96JL9 665 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 EIF2B3Q9NR50 452 aaKnown RBP17.28■□□□□ 0.36
CMTM3-213ENST00000566756 ARHGEF4Q9NR80 690 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 NVLO15381 856 aaKnown RBP17.28■□□□□ 0.36
CMTM3-213ENST00000566756 PSMG1O95456 288 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 METTL18O95568 372 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 CHI3L2Q15782 390 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 NBPF20Q3BBV1 942 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 DNAL1Q4LDG9 190 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 MAP3K21Q5TCX8 1036 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 FAXCQ5TGI0 409 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 CAPRIN2Q6IMN6 1127 aaKnown RBP17.28■□□□□ 0.36
CMTM3-213ENST00000566756 CXCL17Q6UXB2 119 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 TMEM40Q8WWA1 233 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 C1orf21Q9H246 121 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 XPNPEP3Q9NQH7 507 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 THAP1Q9NVV9 213 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 ZFATQ9P243 1243 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 ZNF212Q9UDV6 495 aa17.28■□□□□ 0.36
CMTM3-213ENST00000566756 HMX2A2RU54 273 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 H0Y3Z8 333 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 PIK3R2O00459 728 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 NPTXRO95502 500 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 SERPINA6P08185 405 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 PRKAR2AP13861 404 aaKnown RBP17.27■□□□□ 0.36
CMTM3-213ENST00000566756 LBRQ14739 615 aaKnown RBP17.27■□□□□ 0.36
CMTM3-213ENST00000566756 KPNB1Q14974 876 aaKnown RBP17.27■□□□□ 0.36
CMTM3-213ENST00000566756 CCDC6Q16204 474 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 STRADAQ7RTN6 431 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 NDUFAF2Q8N183 169 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 STKLD1Q8NE28 680 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 PRR11Q96HE9 360 aaPredicted RBP17.27■□□□□ 0.36
CMTM3-213ENST00000566756 NAT9Q9BTE0 207 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 FAM96AQ9H5X1 160 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 TAGLN3Q9UI15 199 aa17.27■□□□□ 0.36
CMTM3-213ENST00000566756 HBS1LQ9Y450 684 aaKnown RBP17.27■□□□□ 0.36
CMTM3-213ENST00000566756 DGKIO75912 1065 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 CCND3P30281 292 aaPredicted RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 PGM1P36871 562 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 ACADSBP45954 432 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 RCN1Q15293 331 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 ZBTB6Q15916 424 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 MUM1Q2TAK8 710 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 HSF5Q4G112 596 aaPredicted RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 SYCP2LQ5T4T6 812 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 HEATR6Q6AI08 1181 aaKnown RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 CCSAPQ6IQ19 270 aaPredicted RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 ANO7Q6IWH7 933 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 NET1Q7Z628 596 aaPredicted RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 TTC7BQ86TV6 843 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 ARID3BQ8IVW6 561 aaPredicted RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 SCUBE3Q8IX30 993 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 KIRREL3Q8IZU9 778 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 DEPDC1BQ8WUY9 529 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 STMN2Q93045 179 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 OLFM3Q96PB7 478 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 TSPAN18Q96SJ8 248 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 MRPL45Q9BRJ2 306 aaKnown RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 MTMR10Q9NXD2 777 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 DNAJB4Q9UDY4 337 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 AP4E1Q9UPM8 1137 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 LRCH1Q9Y2L9 728 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 MAD1L1Q9Y6D9 718 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 THSD7BQ9C0I4 1608 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 A0A0A0MRY4 1105 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 TRPA1O75762 1119 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 GABBR2O75899 941 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 GBE1Q04446 702 aa17.26■□□□□ 0.35
CMTM3-213ENST00000566756 BST2Q10589 180 aaKnown RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 SLC10A2Q12908 348 aaPredicted RBP17.26■□□□□ 0.35
CMTM3-213ENST00000566756 STX3Q13277 289 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms