RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 TTI2Q6NXR4 508 aa28.82■■■□□ 2.2
UBFD1-206ENST00000566669 KIAA0907Q7Z7F0 614 aaPredicted RBP28.82■■■□□ 2.2
UBFD1-206ENST00000566669 TFAP2BQ92481 460 aa28.82■■■□□ 2.2
UBFD1-206ENST00000566669 GPR174Q9BXC1 333 aa28.82■■■□□ 2.2
UBFD1-206ENST00000566669 MAN1B1Q9UKM7 699 aa28.82■■■□□ 2.2
UBFD1-206ENST00000566669 METTL12A8MUP2 240 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 FGFR1OPO95684 399 aaKnown RBP28.81■■■□□ 2.2
UBFD1-206ENST00000566669 HLA-FP30511 346 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 COPAP53621 1224 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 ZNF423Q2M1K9 1284 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 TMEM215Q68D42 235 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 PMF1Q6P1K2 205 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 IL27RAQ6UWB1 636 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 ERLEC1Q96DZ1 483 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 TMEM245Q9H330 911 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 GGA2Q9UJY4 613 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 CLEC4EQ9ULY5 219 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 NEUROG3Q9Y4Z2 214 aa28.81■■■□□ 2.2
UBFD1-206ENST00000566669 DLDP09622 509 aaKnown RBP28.8■■■□□ 2.2
UBFD1-206ENST00000566669 PABPC1P11940 636 aaKnown RBP28.8■■■□□ 2.2
UBFD1-206ENST00000566669 PRKCHP24723 683 aa28.8■■■□□ 2.2
UBFD1-206ENST00000566669 ACADSBP45954 432 aa28.8■■■□□ 2.2
UBFD1-206ENST00000566669 MARSP56192 900 aaKnown RBP28.8■■■□□ 2.2
UBFD1-206ENST00000566669 SIM1P81133 766 aaPredicted RBP28.8■■■□□ 2.2
UBFD1-206ENST00000566669 FNDC3BQ53EP0 1204 aaKnown RBP28.8■■■□□ 2.2
UBFD1-206ENST00000566669 SMYD5Q6GMV2 418 aa28.8■■■□□ 2.2
UBFD1-206ENST00000566669 CHST9Q7L1S5 443 aa28.8■■■□□ 2.2
UBFD1-206ENST00000566669 BEND5Q7L4P6 421 aa28.8■■■□□ 2.2
UBFD1-206ENST00000566669 KDF1Q8NAX2 398 aaPredicted RBP28.8■■■□□ 2.2
UBFD1-206ENST00000566669 LMO3Q8TAP4 145 aa28.8■■■□□ 2.2
UBFD1-206ENST00000566669 NELFBQ8WX92 580 aa28.8■■■□□ 2.2
UBFD1-206ENST00000566669 ERCC4Q92889 916 aaPredicted RBP28.8■■■□□ 2.2
UBFD1-206ENST00000566669 FAM81BQ96LP2 452 aa28.8■■■□□ 2.2
UBFD1-206ENST00000566669 SERPINB11Q96P15 392 aa28.8■■■□□ 2.2
UBFD1-206ENST00000566669 ABCB8Q9NUT2 735 aa28.8■■■□□ 2.2
UBFD1-206ENST00000566669 CACNA1EQ15878 2313 aa28.8■■■□□ 2.2
UBFD1-206ENST00000566669 PCDH15Q96QU1 1955 aa28.79■■■□□ 2.2
UBFD1-206ENST00000566669 TSPAN3O60637 253 aa28.79■■■□□ 2.2
UBFD1-206ENST00000566669 PIK3R6Q5UE93 754 aa28.79■■■□□ 2.2
UBFD1-206ENST00000566669 CCDC117Q8IWD4 279 aaPredicted RBP28.79■■■□□ 2.2
UBFD1-206ENST00000566669 EHBP1Q8NDI1 1231 aa28.79■■■□□ 2.2
UBFD1-206ENST00000566669 STK32AQ8WU08 396 aa28.79■■■□□ 2.2
UBFD1-206ENST00000566669 SCNM1Q9BWG6 230 aa28.79■■■□□ 2.2
UBFD1-206ENST00000566669 CD93Q9NPY3 652 aa28.79■■■□□ 2.2
UBFD1-206ENST00000566669 SUN2Q9UH99 717 aa28.79■■■□□ 2.2
UBFD1-206ENST00000566669 PCNX2A6NKB5 2137 aa28.79■■■□□ 2.2
UBFD1-206ENST00000566669 MSI1O43347 362 aaKnown RBP28.78■■■□□ 2.2
UBFD1-206ENST00000566669 MED7O43513 233 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 ACSL4O60488 711 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 GJB3O75712 270 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 ZNF883P0CG24 379 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 CD59P13987 128 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 POLR2EP19388 210 aaKnown RBP28.78■■■□□ 2.2
UBFD1-206ENST00000566669 RGS7P49802 495 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 TBX4P57082 545 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 SFSWAPQ12872 951 aaKnown RBP28.78■■■□□ 2.2
UBFD1-206ENST00000566669 KLHL10Q6JEL2 608 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 ENOSF1Q7L5Y1 443 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 TRIM59Q8IWR1 403 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 HJURPQ8NCD3 748 aaPredicted RBP28.78■■■□□ 2.2
UBFD1-206ENST00000566669 SORCS1Q8WY21 1168 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 LHX5Q9H2C1 402 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 FSCN3Q9NQT6 498 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 SCML1Q9UN30 329 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 CNTN6Q9UQ52 1028 aa28.78■■■□□ 2.2
UBFD1-206ENST00000566669 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.78■■■□□ 2.2
UBFD1-206ENST00000566669 FRYQ5TBA9 3013 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 KCNJ18B7U540 433 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 PPP1R3GB7ZBB8 358 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 BCAT2O15382 392 aaPredicted RBP28.77■■■□□ 2.2
UBFD1-206ENST00000566669 CER1O95813 267 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 CD44P16070 742 aaKnown RBP28.77■■■□□ 2.2
UBFD1-206ENST00000566669 RPL34P49207 117 aaKnown RBP28.77■■■□□ 2.2
UBFD1-206ENST00000566669 KCNH2Q12809 1159 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 GRIK2Q13002 908 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 MORC3Q14149 939 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 DCAF12L1Q5VU92 463 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 ADIPOR2Q86V24 386 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 TLR6Q9Y2C9 796 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 PCDHB9Q9Y5E1 797 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 GTF3C3Q9Y5Q9 886 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 CKAP5Q14008 2032 aa28.77■■■□□ 2.2
UBFD1-206ENST00000566669 AFPP02771 609 aaKnown RBP28.76■■■□□ 2.19
UBFD1-206ENST00000566669 ASLP04424 464 aa28.76■■■□□ 2.19
UBFD1-206ENST00000566669 BRD2P25440 801 aaKnown RBP28.76■■■□□ 2.19
UBFD1-206ENST00000566669 PAK1Q13153 545 aa28.76■■■□□ 2.19
UBFD1-206ENST00000566669 TTC31Q49AM3 519 aaPredicted RBP28.76■■■□□ 2.19
UBFD1-206ENST00000566669 MBLAC2Q68D91 279 aa28.76■■■□□ 2.19
UBFD1-206ENST00000566669 KDM1BQ8NB78 822 aa28.76■■■□□ 2.19
UBFD1-206ENST00000566669 RNF225M0QZC1 329 aaPredicted RBP28.75■■■□□ 2.19
UBFD1-206ENST00000566669 TBL1XO60907 577 aa28.75■■■□□ 2.19
UBFD1-206ENST00000566669 MAOBP27338 520 aa28.75■■■□□ 2.19
UBFD1-206ENST00000566669 ST8SIA6P61647 398 aa28.75■■■□□ 2.19
UBFD1-206ENST00000566669 ISM2Q6H9L7 571 aa28.75■■■□□ 2.19
UBFD1-206ENST00000566669 RRAGAQ7L523 313 aa28.75■■■□□ 2.19
UBFD1-206ENST00000566669 MFN1Q8IWA4 741 aa28.75■■■□□ 2.19
UBFD1-206ENST00000566669 FIBINQ8TAL6 211 aa28.75■■■□□ 2.19
UBFD1-206ENST00000566669 ZSWIM1Q9BR11 485 aa28.75■■■□□ 2.19
UBFD1-206ENST00000566669 MIR1-1HGQ9H1L0 117 aa28.75■■■□□ 2.19
UBFD1-206ENST00000566669 OSGEPQ9NPF4 335 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms