RNA–Protein interactions for RNA: ENST00000565143.1

PKM-214, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 2,301 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-214ENST00000565143 PDK1Q15118 436 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 RCN1Q15293 331 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 FASTKD1Q53R41 847 aaKnown RBP13.17□□□□□ -0.3
PKM-214ENST00000565143 ACSBG2Q5FVE4 666 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 GLRA4Q5JXX5 417 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 PACS1Q6VY07 963 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 WDR75Q8IWA0 830 aaKnown RBP13.17□□□□□ -0.3
PKM-214ENST00000565143 KIRREL3Q8IZU9 778 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 APPL2Q8NEU8 664 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 OR6J1Q8NGC5 347 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 SLC2A14Q8TDB8 520 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 MAGEB5Q9BZ81 275 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 SUFUQ9UMX1 484 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 GINS2Q9Y248 185 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 F8W8V4 182 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 PPP1R12AO14974 1030 aaPredicted RBP13.16□□□□□ -0.3
PKM-214ENST00000565143 NVLO15381 856 aaKnown RBP13.16□□□□□ -0.3
PKM-214ENST00000565143 ENO1P06733 434 aaKnown RBP13.16□□□□□ -0.3
PKM-214ENST00000565143 LMO2P25791 158 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 TAF6P49848 677 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 SLC34A1Q06495 639 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 MUM1Q2TAK8 710 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 DNAL1Q4LDG9 190 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 CES4AQ5XG92 561 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 DEFB106AQ8N104 65 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 CCDC33Q8N5R6 958 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 PDCD7Q8N8D1 485 aaKnown RBP13.16□□□□□ -0.3
PKM-214ENST00000565143 LGMNQ99538 433 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 FAM49AQ9H0Q0 323 aaPredicted RBP13.16□□□□□ -0.3
PKM-214ENST00000565143 FAM96AQ9H5X1 160 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 XPNPEP3Q9NQH7 507 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 SETD4Q9NVD3 440 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 STX18Q9P2W9 335 aaKnown RBP13.16□□□□□ -0.3
PKM-214ENST00000565143 CORO1CQ9ULV4 474 aaPredicted RBP13.16□□□□□ -0.3
PKM-214ENST00000565143 HES2Q9Y543 173 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 PDCD11Q14690 1871 aaKnown RBP13.16□□□□□ -0.3
PKM-214ENST00000565143 RNF103O00237 685 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 HCRTO43612 131 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 MFSD11O43934 449 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 SMNDC1O75940 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
PKM-214ENST00000565143 KITP10721 976 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 DARSP14868 501 aaKnown RBP13.16□□□□□ -0.3
PKM-214ENST00000565143 SMPD1P17405 629 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 AP1B1Q10567 949 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 INSCQ1MX18 579 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 SV2CQ496J9 727 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 C6orf163Q5TEZ5 329 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 TRIM68Q6AZZ1 485 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 LIMS2Q7Z4I7 341 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 FAM131BQ86XD5 332 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 TREML1Q86YW5 311 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 PYROXD2Q8N2H3 581 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 RNF139Q8WU17 664 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 RILPQ96NA2 401 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 CCDC106Q9BWC9 280 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 NXF3Q9H4D5 531 aaKnown RBP13.16□□□□□ -0.3
PKM-214ENST00000565143 STAP1Q9ULZ2 295 aa13.16□□□□□ -0.3
PKM-214ENST00000565143 SMIM28A0A1B0GU29 152 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 SMIM35A0A1B0GVV1 85 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 HUS1O60921 280 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 MGAT1P26572 445 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 NOS2P35228 1153 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 GJA5P36382 358 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 GARSP41250 739 aaKnown RBP13.15□□□□□ -0.3
PKM-214ENST00000565143 ABL2P42684 1182 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 SESN2P58004 480 aaPredicted RBP13.15□□□□□ -0.3
PKM-214ENST00000565143 TMEM62Q0P6H9 643 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 N4BP2L1Q5TBK1 243 aaPredicted RBP13.15□□□□□ -0.3
PKM-214ENST00000565143 NET1Q7Z628 596 aaPredicted RBP13.15□□□□□ -0.3
PKM-214ENST00000565143 FAM149B1Q96BN6 582 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 P2RY11Q96G91 374 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 ZNF333Q96JL9 665 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 OSMRQ99650 979 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 HNRNPABQ99729 332 aaKnown RBP13.15□□□□□ -0.3
PKM-214ENST00000565143 DUSP16Q9BY84 665 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 C1orf21Q9H246 121 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 ZNF395Q9H8N7 513 aaPredicted RBP13.15□□□□□ -0.3
PKM-214ENST00000565143 IGSF9Q9P2J2 1179 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 MARCOQ9UEW3 520 aaPredicted RBP13.15□□□□□ -0.3
PKM-214ENST00000565143 MFHAS1Q9Y4C4 1052 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 PCNTO95613 3336 aa13.15□□□□□ -0.3
PKM-214ENST00000565143 TPP1O14773 563 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 PLIN3O60664 434 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 CIB2O75838 187 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 KRT36O76013 467 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 ALDOAP04075 364 aaKnown RBP13.14□□□□□ -0.31
PKM-214ENST00000565143 KCNE1P15382 129 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 PAFAH1B3Q15102 231 aaKnown RBP13.14□□□□□ -0.31
PKM-214ENST00000565143 SNX30Q5VWJ9 437 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 MBLAC2Q68D91 279 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 IQSEC1Q6DN90 963 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 PIGZQ86VD9 579 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 PPFIBP2Q8ND30 876 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 PIWIL2Q8TC59 973 aaKnown RBP13.14□□□□□ -0.31
PKM-214ENST00000565143 MICAL1Q8TDZ2 1067 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
PKM-214ENST00000565143 ARNTL2Q8WYA1 636 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 NRCAMQ92823 1304 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 NT5C3BQ969T7 300 aa13.14□□□□□ -0.31
PKM-214ENST00000565143 APOL6Q9BWW8 343 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms