RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FIS1Q9Y3D6 152 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 A0A0J9YVX5 310 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PLIN3O60664 434 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ATP6V1G1O75348 118 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SPAG6O75602 509 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 LDHAP00338 332 aaKnown RBP21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 RGS2P41220 211 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 HPCAP84074 193 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SNAPC2Q13487 334 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 FAM219BQ5XKK7 198 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 NLGN1Q8N2Q7 840 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SNX31Q8N9S9 440 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SMIM31A0A1B0GVY4 71 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 B4GALT5O43286 388 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TMCC1O94876 653 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 EGFRP00533 1210 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CDK4P11802 303 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CCND2P30279 289 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 MS4A2Q01362 244 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 GRM2Q14416 872 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 MAP3K21Q5TCX8 1036 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 NAPRTQ6XQN6 538 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 KBTBD6Q86V97 674 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 KLHL23Q8NBE8 558 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TMA16Q96EY4 203 aaKnown RBP21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 RPAP3Q9H6T3 665 aaPredicted RBP21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ASNSD1Q9NWL6 643 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TMCO1Q9UM00 188 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ARHGAP26Q9UNA1 814 aa21.08■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SYNJ2BP-COX16A0A087WUM0 186 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 APOL1O14791 398 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 IL4RP24394 825 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 MGAT1P26572 445 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TPP2P29144 1249 aaPredicted RBP21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ADARP55265 1226 aaKnown RBP21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 KLF10Q13118 480 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SNRNP48Q6IEG0 339 aaKnown RBP21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ZNF534Q76KX8 674 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SCUBE3Q8IX30 993 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 UBR7Q8N806 425 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 B3GNT5Q9BYG0 378 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 COX16Q9P0S2 106 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 DKC1O60832 514 aaKnown RBP eCLIP21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ATG7O95352 703 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 IL1BP01584 269 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CHRNGP07510 517 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 HDAC4P56524 1084 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 XKR3Q5GH77 459 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TSHZ1Q6ZSZ6 1077 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TRIM67Q6ZTA4 783 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 LILRA2Q8N149 483 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 BHLHE22Q8NFJ8 381 aaPredicted RBP21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 AGAP3Q96P47 875 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PORCNQ9H237 461 aa21.07■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CXCL8P10145 99 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TBCCQ15814 346 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 WDR78Q5VTH9 848 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 RNF149Q8NC42 400 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 LPIN3Q9BQK8 851 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ZNF302Q9NR11 478 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TXNDC16Q9P2K2 825 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PPP1R1BQ9UD71 204 aaPredicted RBP21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ZNF180Q9UJW8 692 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CROCCQ5TZA2 2017 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ASNSP08243 561 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SLC5A2P31639 672 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 GABRB2P47870 512 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 DUS1LQ6P1R4 473 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 BRSK2Q8IWQ3 736 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PKP2Q99959 881 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ELOVL4Q9GZR5 314 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 EFR3BQ9Y2G0 817 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SERPINE1P05121 402 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 IRF9Q00978 393 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TFDP2Q14188 446 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ABHD15Q6UXT9 468 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CYP4V2Q6ZWL3 525 aaPredicted RBP21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 NLRP4Q96MN2 994 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CATSPER2Q96P56 530 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 LGMNQ99538 433 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ZNF518BQ9C0D4 1074 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ITGA11Q9UKX5 1188 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 RPS6KL1Q9Y6S9 549 aa21.06■□□□□ 0.96
MAP1LC3B-206ENST00000564844 FAM159BA6NKW6 160 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ARSAP15289 507 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 GPD1P21695 349 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ABCE1P61221 599 aaKnown RBP21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 FAM183BPQ6ZVS7 135 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TRIM50Q86XT4 487 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ATP2A3Q93084 1043 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 RCN3Q96D15 328 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 MRIQ9BWK5 157 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 NRDE2Q9H7Z3 1164 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CAAP1Q9H8G2 361 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 INO80B-WBP1J3KQ70 363 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 APBA3O96018 575 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 STT3AP46977 705 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 GLRBP48167 497 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 MCCD1P59942 119 aaPredicted RBP21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ZNF667Q5HYK9 610 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms