RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 SYCP3Q8IZU3 236 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 SORCS1Q8WY21 1168 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 HPS3Q969F9 1004 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 SKA1Q96BD8 255 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 SLC6A18Q96N87 628 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 GTPBP4Q9BZE4 634 aaKnown RBP16.7■□□□□ 0.26
RNF40-205ENST00000563909 DPH1Q9BZG8 443 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 CIPCQ9C0C6 399 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 SLC39A2Q9NP94 309 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 IL37Q9NZH6 218 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 PCDHA5Q9Y5H7 936 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 MT-CO3P00414 261 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 CASP5P51878 434 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 SLC5A3P53794 718 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 C6orf132Q5T0Z8 1188 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 ZNF574Q6ZN55 896 aaPredicted RBP16.69■□□□□ 0.26
RNF40-205ENST00000563909 LSMEM2Q8N112 164 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 SPATA20Q8TB22 786 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 ZNF507Q8TCN5 953 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 GPT2Q8TD30 523 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 ANKRD36BP1Q96IX9 119 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 CBWD1Q9BRT8 395 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.69■□□□□ 0.26
RNF40-205ENST00000563909 CLSTN2Q9H4D0 955 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 PCIF1Q9H4Z3 704 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 ANKMY1Q9P2S6 941 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 ADAMTS1Q9UHI8 967 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 LRRK2Q5S007 2527 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 UBE4BO95155 1302 aa16.69■□□□□ 0.26
RNF40-205ENST00000563909 TERTO14746 1132 aaKnown RBP16.68■□□□□ 0.26
RNF40-205ENST00000563909 YKT6O15498 198 aa16.68■□□□□ 0.26
RNF40-205ENST00000563909 PRPF6O94906 941 aaKnown RBP16.68■□□□□ 0.26
RNF40-205ENST00000563909 KIF20AO95235 890 aa16.68■□□□□ 0.26
RNF40-205ENST00000563909 IGHV4-34P06331 123 aa16.68■□□□□ 0.26
RNF40-205ENST00000563909 EPHA8P29322 1005 aaPredicted RBP16.68■□□□□ 0.26
RNF40-205ENST00000563909 ATP5C1P36542 298 aaKnown RBP16.68■□□□□ 0.26
RNF40-205ENST00000563909 ARRB1P49407 418 aaPredicted RBP16.68■□□□□ 0.26
RNF40-205ENST00000563909 GABREP78334 506 aa16.68■□□□□ 0.26
RNF40-205ENST00000563909 STK4Q13043 487 aa16.68■□□□□ 0.26
RNF40-205ENST00000563909 CAMK2GQ13555 558 aaPredicted RBP16.68■□□□□ 0.26
RNF40-205ENST00000563909 CAMK4Q16566 473 aa16.68■□□□□ 0.26
RNF40-205ENST00000563909 EPM2AIP1Q7L775 607 aaPredicted RBP16.68■□□□□ 0.26
RNF40-205ENST00000563909 B3GALNT2Q8NCR0 500 aa16.68■□□□□ 0.26
RNF40-205ENST00000563909 OR5B17Q8NGF7 314 aa16.68■□□□□ 0.26
RNF40-205ENST00000563909 NUP62CLQ9H1M0 184 aa16.68■□□□□ 0.26
RNF40-205ENST00000563909 NOTCH2Q04721 2471 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 FAM92AA1XBS5 289 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 TACC1O75410 805 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 PENKP01210 267 aaPredicted RBP16.67■□□□□ 0.26
RNF40-205ENST00000563909 TNNC2P02585 160 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 WNT1P04628 370 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 ERVPABLB-1P60509 514 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 ARID5AQ03989 594 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 BNIP3Q12983 259 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 EIF4HQ15056 248 aaKnown RBP16.67■□□□□ 0.26
RNF40-205ENST00000563909 FYB2Q5VWT5 728 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 ANKS1BQ7Z6G8 1248 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 GPD1LQ8N335 351 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 ERCC4Q92889 916 aaPredicted RBP16.67■□□□□ 0.26
RNF40-205ENST00000563909 PIWIL1Q96J94 861 aaKnown RBP16.67■□□□□ 0.26
RNF40-205ENST00000563909 MED10Q9BTT4 135 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 FGFBP2Q9BYJ0 223 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 SGK2Q9HBY8 427 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 GDF3Q9NR23 364 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 COMMD8Q9NX08 183 aa16.67■□□□□ 0.26
RNF40-205ENST00000563909 SPTAN1Q13813 2472 aaKnown RBP16.67■□□□□ 0.26
RNF40-205ENST00000563909 FAM47DPA6NHR8 397 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 A8MXQ7 604 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 K7ENP7 123 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 DXOO77932 396 aaKnown RBP16.66■□□□□ 0.26
RNF40-205ENST00000563909 DNTTP04053 509 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 GP1BBP13224 206 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 RPS14P62263 151 aaKnown RBP16.66■□□□□ 0.26
RNF40-205ENST00000563909 E2F1Q01094 437 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 CKAP5Q14008 2032 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 DUOXA2Q1HG44 320 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 BMT2Q1RMZ1 405 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 ZNF658Q5TYW1 1059 aaPredicted RBP16.66■□□□□ 0.26
RNF40-205ENST00000563909 KIAA0895LQ68EN5 471 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 INO80CQ6PI98 192 aaPredicted RBP16.66■□□□□ 0.26
RNF40-205ENST00000563909 Q6ZNB5 142 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 ATG14Q6ZNE5 492 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 ZNF366Q8N895 744 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 EXD3Q8N9H8 876 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 RBBP8NLQ8NC74 664 aaPredicted RBP16.66■□□□□ 0.26
RNF40-205ENST00000563909 KIAA0895Q8NCT3 520 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 DMAP1Q9NPF5 467 aaPredicted RBP16.66■□□□□ 0.26
RNF40-205ENST00000563909 TLR8Q9NR97 1041 aaKnown RBP16.66■□□□□ 0.26
RNF40-205ENST00000563909 AASDHPPTQ9NRN7 309 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 KIAA1468Q9P260 1216 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 ATP8B3O60423 1300 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 MYH10P35580 1976 aa16.66■□□□□ 0.26
RNF40-205ENST00000563909 A0A1W2PPC4 97 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 TIMM44O43615 452 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 USP12O75317 370 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 ACP1P24666 158 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 CD38P28907 300 aa16.65■□□□□ 0.26
RNF40-205ENST00000563909 SNRPFP62306 86 aaKnown RBP16.65■□□□□ 0.26
RNF40-205ENST00000563909 NFKB2Q00653 900 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms