RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 HDDC3Q8N4P3 179 aa16.89■□□□□ 0.29
SNX1-213ENST00000561026 CADM4Q8NFZ8 388 aa16.89■□□□□ 0.29
SNX1-213ENST00000561026 WFIKKN2Q8TEU8 576 aa16.89■□□□□ 0.29
SNX1-213ENST00000561026 GOLGA1Q92805 767 aa16.89■□□□□ 0.29
SNX1-213ENST00000561026 KREMEN1Q96MU8 473 aa16.89■□□□□ 0.29
SNX1-213ENST00000561026 SRRTQ9BXP5 876 aaKnown RBP16.89■□□□□ 0.29
SNX1-213ENST00000561026 IRX2Q9BZI1 471 aaPredicted RBP16.89■□□□□ 0.29
SNX1-213ENST00000561026 SLC32A1Q9H598 525 aa16.89■□□□□ 0.29
SNX1-213ENST00000561026 ABCB8Q9NUT2 735 aa16.89■□□□□ 0.29
SNX1-213ENST00000561026 SUSD2Q9UGT4 822 aa16.89■□□□□ 0.29
SNX1-213ENST00000561026 PLA2G4CQ9UP65 541 aa16.89■□□□□ 0.29
SNX1-213ENST00000561026 CNTN6Q9UQ52 1028 aa16.89■□□□□ 0.29
SNX1-213ENST00000561026 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNX1-213ENST00000561026 IRAK2O43187 625 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 OPHN1O60890 802 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 IGLV3-19P01714 112 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 AFPP02771 609 aaKnown RBP16.88■□□□□ 0.29
SNX1-213ENST00000561026 GNSP15586 552 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 MAOBP27338 520 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 OXTRP30559 389 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 GPD2P43304 727 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 RPL34P49207 117 aaKnown RBP16.88■□□□□ 0.29
SNX1-213ENST00000561026 SLC11A2P49281 568 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 SGSHP51688 502 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 FOXC1Q12948 553 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 CAMK2GQ13555 558 aaPredicted RBP16.88■□□□□ 0.29
SNX1-213ENST00000561026 PLEKHG6Q3KR16 790 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 PIK3R6Q5UE93 754 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 RFWD3Q6PCD5 774 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 SCUBE3Q8IX30 993 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 MINDY1Q8N5J2 469 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.88■□□□□ 0.29
SNX1-213ENST00000561026 DNASE2BQ8WZ79 361 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 AZIN2Q96A70 460 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 GPR174Q9BXC1 333 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 MIS12Q9H081 205 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 INTS2Q9H0H0 1204 aaKnown RBP16.88■□□□□ 0.29
SNX1-213ENST00000561026 TMEM245Q9H330 911 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 NFE2L3Q9Y4A8 694 aa16.88■□□□□ 0.29
SNX1-213ENST00000561026 GOLGA6L7A0A1B0GV03 622 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 FYNP06241 537 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 ACADMP11310 421 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 PABPC1P11940 636 aaKnown RBP16.87■□□□□ 0.29
SNX1-213ENST00000561026 HLA-EP13747 358 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 TBX4P57082 545 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 FNDC3BQ53EP0 1204 aaKnown RBP16.87■□□□□ 0.29
SNX1-213ENST00000561026 FAM133BQ5BKY9 247 aaKnown RBP16.87■□□□□ 0.29
SNX1-213ENST00000561026 CHST9Q7L1S5 443 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 AHI1Q8N157 1196 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 OR2I1PQ8NGU4 316 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 OR2T3Q8NH03 318 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 CYB5D2Q8WUJ1 264 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 NUP58Q9BVL2 599 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 DNAAF2Q9NVR5 837 aaKnown RBP16.87■□□□□ 0.29
SNX1-213ENST00000561026 GGA2Q9UJY4 613 aa16.87■□□□□ 0.29
SNX1-213ENST00000561026 PCDH15Q96QU1 1955 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 ASPMQ8IZT6 3477 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 METTL12A8MUP2 240 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 MEI4A8MW99 385 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 ACSL4O60488 711 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 TBL1XO60907 577 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 FGFR1OPO95684 399 aaKnown RBP16.86■□□□□ 0.29
SNX1-213ENST00000561026 ATP5BP06576 529 aaKnown RBP16.86■□□□□ 0.29
SNX1-213ENST00000561026 DLDP09622 509 aaKnown RBP16.86■□□□□ 0.29
SNX1-213ENST00000561026 C7P10643 843 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 KRT5P13647 590 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 SLC6A4P31645 630 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 PTPRNQ16849 979 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 MBLAC2Q68D91 279 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 NADSYN1Q6IA69 706 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 WFDC5Q8TCV5 224 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 DQX1Q8TE96 717 aaKnown RBP16.86■□□□□ 0.29
SNX1-213ENST00000561026 STK32AQ8WU08 396 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 UBE2TQ9NPD8 197 aaPredicted RBP16.86■□□□□ 0.29
SNX1-213ENST00000561026 ST7Q9NRC1 585 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 TLR6Q9Y2C9 796 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 CKAP5Q14008 2032 aa16.86■□□□□ 0.29
SNX1-213ENST00000561026 CFAP47Q6ZTR5 3102 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 SART1O43290 800 aaKnown RBP16.85■□□□□ 0.29
SNX1-213ENST00000561026 TOP3BO95985 862 aaKnown RBP16.85■□□□□ 0.29
SNX1-213ENST00000561026 CD59P13987 128 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 CD70P32970 193 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 ACADSBP45954 432 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 SLC14A1Q13336 389 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 NNTQ13423 1086 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 DENND1BQ6P3S1 775 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 BEND5Q7L4P6 421 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 CACUL1Q86Y37 369 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 FAM149B1Q96BN6 582 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 FCRL2Q96LA5 508 aaPredicted RBP16.85■□□□□ 0.29
SNX1-213ENST00000561026 SERPINB11Q96P15 392 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 DDX50Q9BQ39 737 aaKnown RBP16.85■□□□□ 0.29
SNX1-213ENST00000561026 ZDHHC5Q9C0B5 715 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 NAALADL1Q9UQQ1 740 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 ADAMTS9Q9P2N4 1935 aa16.85■□□□□ 0.29
SNX1-213ENST00000561026 ZFHX4Q86UP3 3567 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 A0A1B0GTW7 788 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 SPAARA0A1B0GVQ0 90 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 MED7O43513 233 aa16.84■□□□□ 0.29
SNX1-213ENST00000561026 GJB3O75712 270 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms