RNA–Protein interactions for RNA: ENST00000560744.1

AP001007.3-201, humanhuman

TSL 5 BASIC

Gene AP001007.3, Length 356 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001007.3-201ENST00000560744 USP13Q92995 863 aaPredicted RBP6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 TRMT2BQ96GJ1 504 aaKnown RBP6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 SPATA17Q96L03 361 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 GDAP1L1Q96MZ0 367 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 RUNDC3BQ96NL0 473 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 SLC22A12Q96S37 553 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 CYP2S1Q96SQ9 504 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 PCDHB18PQ96TA0 734 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 CAPS2Q9BXY5 557 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 B3GNT5Q9BYG0 378 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 BCO2Q9BYV7 579 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 ZNF518BQ9C0D4 1074 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 SLC6A16Q9GZN6 736 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 DDX47Q9H0S4 455 aaKnown RBP6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 VRTNQ9H8Y1 702 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 TRPC7Q9HCX4 862 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 GKN1Q9NS71 199 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 TMEM30AQ9NV96 361 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 SPATA6Q9NWH7 488 aaPredicted RBP6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 GRHL1Q9NZI5 618 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 UXTQ9UBK9 157 aaPredicted RBP6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 FEZ2Q9UHY8 353 aaPredicted RBP6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 ZMYM5Q9UJ78 669 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 CCL26Q9Y258 94 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 RRP15Q9Y3B9 282 aaKnown RBP6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 ALG6Q9Y672 507 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 R4GN57 208 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 MIA3Q5JRA6 1907 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 DENND4CQ5VZ89 1909 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 TICRRQ7Z2Z1 1910 aa6.31□□□□□ -1.4
AP001007.3-201ENST00000560744 FAM186AA6NE01 2351 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 C2orf78A6NCI8 922 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 PRR23AA6NEV1 266 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 SOBPA7XYQ1 873 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 F8VP50 259 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 SPECC1L-ADORA2AF8WAN1 911 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 MYO1FO00160 1098 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 TP73O15350 636 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 LAMTOR5O43504 91 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 PHF2O75151 1096 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 ASS1P00966 412 aaKnown RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 KRT14P02533 472 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 FGGP02679 453 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 UNGP13051 313 aaPredicted RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 TNFAIP3P21580 790 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 DDX6P26196 483 aaKnown RBP eCLIP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 CTHP32929 405 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 AVPR1AP37288 418 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 PIK3CAP42336 1068 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 NOP2P46087 812 aaKnown RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 RPS9P46781 194 aaKnown RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 GCLMP48507 274 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 FNTAP49354 379 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 KPNA1P52294 538 aaPredicted RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 MLLT6P55198 1093 aaPredicted RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 NAP1L1P55209 391 aaKnown RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 EIF3BP55884 814 aaKnown RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 MRPS25P82663 173 aaKnown RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 CDR2Q01850 454 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 MTAPQ13126 283 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 ORC1Q13415 861 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 SGSM1Q2NKQ1 1148 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 KRT39Q6A163 491 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 TXNDC11Q6PKC3 985 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 DENND5BQ6ZUT9 1274 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 PAQR9Q6ZVX9 377 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 ACOT1Q86TX2 421 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 DNAAF5Q86Y56 855 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 UBR7Q8N806 425 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 ARL14EPQ8N8R7 260 aaPredicted RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 PRELID2Q8N945 189 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 B3GALNT2Q8NCR0 500 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 RIN3Q8TB24 985 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 TAS1R2Q8TE23 839 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 SEMA4DQ92854 862 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 NKD2Q969F2 451 aaPredicted RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 CENPTQ96BT3 561 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 C8orf48Q96LL4 319 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 FAM83CQ9BQN1 747 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 ERP44Q9BS26 406 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 TTLL2Q9BWV7 592 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 RAB17Q9H0T7 212 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 LRRC19Q9H756 370 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 C8orf33Q9H7E9 229 aaPredicted RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 LMAN1LQ9HAT1 526 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 APOBEC3GQ9HC16 384 aaKnown RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 UBE2TQ9NPD8 197 aaPredicted RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 HPS4Q9NQG7 708 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 TDP1Q9NUW8 608 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 THG1LQ9NWX6 298 aaKnown RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 GTSE1Q9NYZ3 720 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 LCMT1Q9UIC8 334 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 PLAAQ9Y263 795 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 COL4A2P08572 1712 aa6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 NUP210Q8TEM1 1887 aaPredicted RBP6.3□□□□□ -1.4
AP001007.3-201ENST00000560744 ZNF638Q14966 1978 aaKnown RBP6.29□□□□□ -1.4
AP001007.3-201ENST00000560744 EP300Q09472 2414 aaPredicted RBP6.29□□□□□ -1.4
AP001007.3-201ENST00000560744 PTPRDP23468 1912 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms