RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 PRICKLE1Q96MT3 831 aaPredicted RBP16.84■□□□□ 0.29
SPG21-211ENST00000560564 SERPINB11Q96P15 392 aa16.84■□□□□ 0.29
SPG21-211ENST00000560564 EDEM2Q9BV94 578 aa16.84■□□□□ 0.29
SPG21-211ENST00000560564 NDST4Q9H3R1 872 aa16.84■□□□□ 0.29
SPG21-211ENST00000560564 EVLQ9UI08 416 aaPredicted RBP16.84■□□□□ 0.29
SPG21-211ENST00000560564 TLR6Q9Y2C9 796 aa16.84■□□□□ 0.29
SPG21-211ENST00000560564 ZNF217O75362 1048 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 PRKCHP24723 683 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 CLCN1P35523 988 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 PITX1P78337 314 aaPredicted RBP16.83■□□□□ 0.28
SPG21-211ENST00000560564 CACNA1BQ00975 2339 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 KCNMA1Q12791 1236 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 TAF5Q15542 800 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 TPD52L1Q16890 204 aaPredicted RBP16.83■□□□□ 0.28
SPG21-211ENST00000560564 VWA3BQ502W6 1294 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 HSP90AA4PQ58FG1 418 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 SLC36A4Q6YBV0 504 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 RBM43Q6ZSC3 357 aaKnown RBP16.83■□□□□ 0.28
SPG21-211ENST00000560564 SYT12Q8IV01 421 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 SLC41A1Q8IVJ1 513 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 FAM114A1Q8IWE2 563 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 ADAM32Q8TC27 787 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 UCMAQ8WVF2 138 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 PIGKQ92643 395 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 CPXM1Q96SM3 734 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 TUBGCP2Q9BSJ2 902 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 CIPCQ9C0C6 399 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 DNAJC12Q9UKB3 198 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 PILRBQ9UKJ0 227 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 CYP8B1Q9UNU6 501 aa16.83■□□□□ 0.28
SPG21-211ENST00000560564 CABIN1Q9Y6J0 2220 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 FOXN3O00409 490 aaPredicted RBP16.82■□□□□ 0.28
SPG21-211ENST00000560564 IRAK2O43187 625 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 MAP3K13O43283 966 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 TIMM44O43615 452 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 PNMA6AP0CW24 399 aaPredicted RBP16.82■□□□□ 0.28
SPG21-211ENST00000560564 ITPKAP23677 461 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 USP8P40818 1118 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 SLC11A2P49281 568 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 COPAP53621 1224 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 YWHAZP63104 245 aaKnown RBP16.82■□□□□ 0.28
SPG21-211ENST00000560564 IRX4P78413 519 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 RPL6Q02878 288 aaKnown RBP16.82■□□□□ 0.28
SPG21-211ENST00000560564 STARD3Q14849 445 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 PTPRNQ16849 979 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 CT47A1Q5JQC4 288 aaPredicted RBP16.82■□□□□ 0.28
SPG21-211ENST00000560564 PPM1JQ5JR12 505 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 LYSMD4Q5XG99 296 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 FAM71AQ8IYT1 594 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 WFIKKN2Q8TEU8 576 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 NUCKS1Q9H1E3 243 aaKnown RBP16.82■□□□□ 0.28
SPG21-211ENST00000560564 LHX5Q9H2C1 402 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 TMEM245Q9H330 911 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 POPDC2Q9HBU9 364 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 SAMSN1Q9NSI8 373 aaKnown RBP16.82■□□□□ 0.28
SPG21-211ENST00000560564 ABCB8Q9NUT2 735 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 USP36Q9P275 1121 aaKnown RBP16.82■□□□□ 0.28
SPG21-211ENST00000560564 DACH1Q9UI36 760 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 XPO7Q9UIA9 1087 aaKnown RBP16.82■□□□□ 0.28
SPG21-211ENST00000560564 GGA2Q9UJY4 613 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 SPEGQ15772 3267 aa16.82■□□□□ 0.28
SPG21-211ENST00000560564 ATXN2Q99700 1313 aaKnown RBP16.81■□□□□ 0.28
SPG21-211ENST00000560564 CDX4O14627 284 aaPredicted RBP16.81■□□□□ 0.28
SPG21-211ENST00000560564 KHNYNO15037 678 aaKnown RBP16.81■□□□□ 0.28
SPG21-211ENST00000560564 AP5Z1O43299 807 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 TBL1XO60907 577 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 TRUB2O95900 331 aaKnown RBP16.81■□□□□ 0.28
SPG21-211ENST00000560564 ADRB1P08588 477 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 PABPC1P11940 636 aaKnown RBP16.81■□□□□ 0.28
SPG21-211ENST00000560564 CD70P32970 193 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 HOXD12P35452 270 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 MS4A13Q5J8X5 152 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 IL31Q6EBC2 164 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 CHST9Q7L1S5 443 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 SLC47A2Q86VL8 602 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 PASD1Q8IV76 773 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 HJURPQ8NCD3 748 aaPredicted RBP16.81■□□□□ 0.28
SPG21-211ENST00000560564 GPT2Q8TD30 523 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 DDX1Q92499 740 aaKnown RBP16.81■□□□□ 0.28
SPG21-211ENST00000560564 SLC2A13Q96QE2 648 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 TRIM62Q9BVG3 475 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 LSM14BQ9BX40 385 aaKnown RBP16.81■□□□□ 0.28
SPG21-211ENST00000560564 NAA15Q9BXJ9 866 aaKnown RBP16.81■□□□□ 0.28
SPG21-211ENST00000560564 PRDM16Q9HAZ2 1276 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 NYNRINQ9P2P1 1898 aaKnown RBP16.81■□□□□ 0.28
SPG21-211ENST00000560564 ASPMQ8IZT6 3477 aa16.81■□□□□ 0.28
SPG21-211ENST00000560564 C4orf47A7E2U8 309 aa16.8■□□□□ 0.28
SPG21-211ENST00000560564 KCNJ18B7U540 433 aa16.8■□□□□ 0.28
SPG21-211ENST00000560564 IGLV3-19P01714 112 aa16.8■□□□□ 0.28
SPG21-211ENST00000560564 GLI1P08151 1106 aa16.8■□□□□ 0.28
SPG21-211ENST00000560564 HLA-EP13747 358 aa16.8■□□□□ 0.28
SPG21-211ENST00000560564 PRKCSHP14314 528 aaPredicted RBP16.8■□□□□ 0.28
SPG21-211ENST00000560564 RPS24P62847 133 aaKnown RBP16.8■□□□□ 0.28
SPG21-211ENST00000560564 ZNF33AQ06730 810 aa16.8■□□□□ 0.28
SPG21-211ENST00000560564 CAMK2GQ13555 558 aaPredicted RBP16.8■□□□□ 0.28
SPG21-211ENST00000560564 KCNJ12Q14500 433 aa16.8■□□□□ 0.28
SPG21-211ENST00000560564 E2F5Q15329 346 aa16.8■□□□□ 0.28
SPG21-211ENST00000560564 PTPN20Q4JDL3 420 aa16.8■□□□□ 0.28
SPG21-211ENST00000560564 TRIM61Q5EBN2 209 aa16.8■□□□□ 0.28
SPG21-211ENST00000560564 SLC23A3Q6PIS1 610 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms