RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 TRPM6Q9BX84 2022 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 H3BQV1 296 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 YKT6O15498 198 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 BMP15O95972 392 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 MT-CO3P00414 261 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 CYBBP04839 570 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 FAM200BP0CF97 657 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 HOXD9P28356 352 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 RXRGP48443 463 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 CASP4P49662 377 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 PSEN1P49768 467 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 CSRP3P50461 194 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 KIF11P52732 1056 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 NDST1P52848 882 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 PDE4CQ08493 712 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 EFEMP1Q12805 493 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 PROX2Q3B8N5 592 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 TTC31Q49AM3 519 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 COLEC12Q5KU26 742 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 NCEH1Q6PIU2 408 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 SCARA5Q6ZMJ2 495 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 USP30Q70CQ3 517 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 CHST9Q7L1S5 443 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 KIAA0907Q7Z7F0 614 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 DHX40Q8IX18 779 aaKnown RBP9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 FAM217AQ8IXS0 508 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 PLEKHO2Q8TD55 490 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 SKA1Q96BD8 255 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 CLIC6Q96NY7 704 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 PANK2Q9BZ23 570 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 MTG2Q9H4K7 406 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 FBRSQ9HAH7 460 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 GDF3Q9NR23 364 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 AASDHPPTQ9NRN7 309 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 FBXL12Q9NXK8 326 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 SERGEFQ9UGK8 458 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 IL17BQ9UHF5 180 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 ADAMTS1Q9UHI8 967 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 RASAL2Q9UJF2 1139 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 KIF3AQ9Y496 699 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 PCDHA5Q9Y5H7 936 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 USP3Q9Y6I4 520 aa9.36□□□□□ -0.91
RABGGTA-217ENST00000560521 A0A087X0B3 334 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 TLR4O00206 839 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 KLK10O43240 276 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 PHACTR2O75167 634 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 DXOO77932 396 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 VNN1O95497 513 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 C4BPAP04003 597 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 MPOP05164 745 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 RALAP11233 206 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 GJB2P29033 226 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 ARRB1P49407 418 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 CYP2J2P51589 502 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 NXPH1P58417 271 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 E2F1Q01094 437 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 VAC14Q08AM6 782 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 ZNF699Q32M78 642 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 KIAA1614Q5VZ46 1190 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 ZNF776Q68DI1 518 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 EPM2AIP1Q7L775 607 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 CCDC186Q7Z3E2 898 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 SPATS2Q86XZ4 545 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 ZNF507Q8TCN5 953 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 KCNE4Q8WWG9 221 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 GOLGA1Q92805 767 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 CYFIP2Q96F07 1278 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 MYO19Q96H55 970 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 TWNKQ96RR1 684 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 RSPH9Q9H1X1 276 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 NEUROG2Q9H2A3 272 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 PABPC3Q9H361 631 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 ERVMER34-1Q9H9K5 563 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 AGPAT3Q9NRZ7 376 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 CLIC5Q9NZA1 410 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 SUN2Q9UH99 717 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 FBXO2Q9UK22 296 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 NCKAP1Q9Y2A7 1128 aa9.35□□□□□ -0.91
RABGGTA-217ENST00000560521 BOD1L1Q8NFC6 3051 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 A0A1W2PP55 124 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 TRIM38O00635 465 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 SIGLEC6O43699 453 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 ERVPABLB-1P60509 514 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 GABREP78334 506 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 EHHADHQ08426 723 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 BIRC3Q13489 604 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 MPPE1Q53F39 396 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 CDCP2Q5VXM1 449 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 MBLAC2Q68D91 279 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 STXBP4Q6ZWJ1 553 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 PRICKLE2Q7Z3G6 844 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 TADA2BQ86TJ2 420 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 UNC93AQ86WB7 457 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 CCDC65Q8IXS2 484 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 LSMEM2Q8N112 164 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 XXYLT1Q8NBI6 393 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 WFDC5Q8TCV5 224 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 GANCQ8TET4 914 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms