RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 C14orf28Q4W4Y0 310 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 DTHD1Q6ZMT9 781 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 CYB5R4Q7L1T6 521 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 DHX32Q7L7V1 743 aaKnown RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 RAB11FIP2Q7L804 512 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 ZNF589Q86UQ0 364 aaPredicted RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 DTX1Q86Y01 620 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 CYP4X1Q8N118 509 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 SLC25A45Q8N413 288 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 SRBD1Q8N5C6 995 aaKnown RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 FSIP1Q8NA03 581 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 ASAP3Q8TDY4 903 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 LENG9Q96B70 501 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 SRPK1Q96SB4 655 aaKnown RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 SGPP1Q9BX95 441 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 USP29Q9HBJ7 922 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 SENP2Q9HC62 589 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 BRD7Q9NPI1 651 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 TOPORSQ9NS56 1045 aaPredicted RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 DNAJC17Q9NVM6 304 aaKnown RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 TBC1D14Q9P2M4 693 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 DENND4CQ5VZ89 1909 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 TP53BP1Q12888 1972 aaPredicted RBP6.84□□□□□ -1.31
HERC1-208ENST00000560462 NOTCH1P46531 2555 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 OBSL1O75147 1896 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 A0A1W2PR77 199 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 K7EM74 188 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 IFIT3O14879 490 aaKnown RBP6.84□□□□□ -1.31
HERC1-208ENST00000560462 JAK2O60674 1132 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 SIX3O95343 332 aaPredicted RBP6.84□□□□□ -1.31
HERC1-208ENST00000560462 PLEKHA8P1O95397 391 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 GARTP22102 1010 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 ITGA3P26006 1051 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 GNAQP50148 359 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 COPAP53621 1224 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 RPS26P62854 115 aaKnown RBP6.84□□□□□ -1.31
HERC1-208ENST00000560462 PRPF4BQ13523 1007 aaKnown RBP6.84□□□□□ -1.31
HERC1-208ENST00000560462 DCAF4L1Q3SXM0 396 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 SLC45A4Q5BKX6 768 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 ZRANB3Q5FWF4 1079 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 KIAA0895LQ68EN5 471 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 TCTN3Q6NUS6 607 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 DSG4Q86SJ6 1040 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 SLITRK4Q8IW52 837 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 SPPL2BQ8TCT7 592 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 C2orf15Q8WU43 125 aaKnown RBP6.84□□□□□ -1.31
HERC1-208ENST00000560462 SLC5A5Q92911 643 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 C18orf25Q96B23 403 aaPredicted RBP6.84□□□□□ -1.31
HERC1-208ENST00000560462 TRMT2BQ96GJ1 504 aaKnown RBP6.84□□□□□ -1.31
HERC1-208ENST00000560462 APOLD1Q96LR9 279 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 ZMAT2Q96NC0 199 aaKnown RBP6.84□□□□□ -1.31
HERC1-208ENST00000560462 MAP3K14Q99558 947 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 TRIM56Q9BRZ2 755 aaKnown RBP6.84□□□□□ -1.31
HERC1-208ENST00000560462 TRIM9Q9C026 710 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 LIN7BQ9HAP6 207 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 METTL14Q9HCE5 456 aaKnown RBP6.84□□□□□ -1.31
HERC1-208ENST00000560462 CFAP97Q9P2B7 532 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 PRKAB1Q9Y478 270 aa6.84□□□□□ -1.31
HERC1-208ENST00000560462 MXRA5Q9NR99 2828 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 TTC41PQ6P2S7 1318 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 PRAMEF33A0A0G2JMD5 474 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 A0A1W2PQ27 194 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 A0A1W2PQ64 194 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 A0A1W2PQC6 194 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 ZNF891A8MT65 544 aaPredicted RBP6.83□□□□□ -1.32
HERC1-208ENST00000560462 MKRN2OSH3BPM6 223 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 PRPF3O43395 683 aaKnown RBP6.83□□□□□ -1.32
HERC1-208ENST00000560462 PRAMEF10O60809 474 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 DKC1O60832 514 aaKnown RBP eCLIP6.83□□□□□ -1.32
HERC1-208ENST00000560462 JMJD7P0C870 316 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 ALPPL2P10696 532 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 HGFP14210 728 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 DGKAP23743 735 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 SOX18P35713 384 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 TRAPPC10P48553 1259 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 HARS2P49590 506 aaKnown RBP6.83□□□□□ -1.32
HERC1-208ENST00000560462 LIG3P49916 1009 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 PDX1P52945 283 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 ART1P52961 327 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 RNASE9P60153 205 aaKnown RBP6.83□□□□□ -1.32
HERC1-208ENST00000560462 SMARCB1Q12824 385 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 FAM187BQ17R55 369 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 XKR4Q5GH76 650 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 EEF1DP3Q658K8 133 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 WWC2Q6AWC2 1192 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 ALKAL1Q6UXT8 129 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 TMPRSS9Q7Z410 1059 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 CCNJLQ8IV13 435 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 FAM9BQ8IZU0 186 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 OR10T2Q8NGX3 314 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 CPLX3Q8WVH0 158 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 NDRG1Q92597 394 aaKnown RBP6.83□□□□□ -1.32
HERC1-208ENST00000560462 GJA10Q969M2 543 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 OTUB2Q96DC9 234 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 MYRFLQ96LU7 910 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 TCF12Q99081 682 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 CCDC113Q9H0I3 377 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 GLT8D2Q9H1C3 349 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 LHX5Q9H2C1 402 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 TTC12Q9H892 705 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms