RNA–Protein interactions for RNA: ENST00000560365.5

IRF9-209, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-209ENST00000560365 PPP1R26Q5T8A7 1209 aaPredicted RBP12.12□□□□□ -0.47
IRF9-209ENST00000560365 KIAA0895LQ68EN5 471 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 SLC9A9Q8IVB4 645 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 TTC39CQ8N584 583 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 ZNF366Q8N895 744 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 TMA16Q96EY4 203 aaKnown RBP12.12□□□□□ -0.47
IRF9-209ENST00000560365 TWNKQ96RR1 684 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 ELF4Q99607 663 aaPredicted RBP12.12□□□□□ -0.47
IRF9-209ENST00000560365 BACH2Q9BYV9 841 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 NIF3L1Q9GZT8 377 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 TMEM245Q9H330 911 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 GDF3Q9NR23 364 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 AASDHPPTQ9NRN7 309 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 ABCB8Q9NUT2 735 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 GGA2Q9UJY4 613 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 CLEC4EQ9ULY5 219 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 SLCO1B1Q9Y6L6 691 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 TEX51A0A1B0GUA7 166 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 TYW5A2RUC4 315 aaKnown RBP12.11□□□□□ -0.47
IRF9-209ENST00000560365 LRRC72A6NJI9 287 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 CALUO43852 315 aaPredicted RBP12.11□□□□□ -0.47
IRF9-209ENST00000560365 NR3C1P04150 777 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 DLDP09622 509 aaKnown RBP12.11□□□□□ -0.47
IRF9-209ENST00000560365 SLFN14P0C7P3 912 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 PABPC1P11940 636 aaKnown RBP12.11□□□□□ -0.47
IRF9-209ENST00000560365 KRT13P13646 458 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 HOXD9P28356 352 aaPredicted RBP12.11□□□□□ -0.47
IRF9-209ENST00000560365 CASP1P29466 404 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 HLA-FP30511 346 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 VAMP7P51809 220 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 EHHADHQ08426 723 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 ZNF394Q53GI3 561 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 TMEM215Q68D42 235 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 USP30Q70CQ3 517 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 GPR155Q7Z3F1 870 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 GATAD2AQ86YP4 633 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 CCDC117Q8IWD4 279 aaPredicted RBP12.11□□□□□ -0.47
IRF9-209ENST00000560365 P2RY11Q96G91 374 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 IPO9Q96P70 1041 aaKnown RBP12.11□□□□□ -0.47
IRF9-209ENST00000560365 NRSN2Q9GZP1 204 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 PRORYQ9H606 182 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 PRSS16Q9NQE7 514 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 HBS1LQ9Y450 684 aaKnown RBP12.11□□□□□ -0.47
IRF9-209ENST00000560365 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
IRF9-209ENST00000560365 MYOFQ9NZM1 2061 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 A0A1W2PPC4 97 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 PDXKO00764 312 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 YEATS4O95619 227 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 LATS1O95835 1130 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 ZBED1O96006 694 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 CD38P28907 300 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 ACTN2P35609 894 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 TKTL1P51854 596 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 TARDBPQ13148 414 aaKnown RBP eCLIP12.1□□□□□ -0.47
IRF9-209ENST00000560365 CUL4BQ13620 913 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 TRIP4Q15650 581 aaPredicted RBP12.1□□□□□ -0.47
IRF9-209ENST00000560365 HES3Q5TGS1 186 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 MBLAC2Q68D91 279 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 INTS8Q75QN2 995 aaKnown RBP12.1□□□□□ -0.47
IRF9-209ENST00000560365 FMNL3Q8IVF7 1028 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 FAM217AQ8IXS0 508 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 OXR1Q8N573 874 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 EID2Q8N6I1 236 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 RBBP8NLQ8NC74 664 aaPredicted RBP12.1□□□□□ -0.47
IRF9-209ENST00000560365 SLC6A18Q96N87 628 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 OMDQ99983 421 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 UBXN6Q9BZV1 441 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 MMRN2Q9H8L6 949 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 LRRC4Q9HBW1 653 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 DMAC2Q9NW81 257 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 FBXL12Q9NXK8 326 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 MTMR6Q9Y217 621 aa12.1□□□□□ -0.47
IRF9-209ENST00000560365 RNASEH2AO75792 299 aaKnown RBP12.09□□□□□ -0.47
IRF9-209ENST00000560365 ME1P48163 572 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 GCLMP48507 274 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 DNAJC3Q13217 504 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 ILKQ13418 452 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 HS1BP3Q53T59 392 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 TAF1BQ53T94 588 aaPredicted RBP12.09□□□□□ -0.47
IRF9-209ENST00000560365 KCNT1Q5JUK3 1230 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 ADGRF1Q5T601 910 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 SHC4Q6S5L8 630 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 PIGZQ86VD9 579 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.09□□□□□ -0.47
IRF9-209ENST00000560365 TMEM174Q8WUU8 243 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 FGF11Q92914 225 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 CCDC47Q96A33 483 aaKnown RBP12.09□□□□□ -0.47
IRF9-209ENST00000560365 TMEM176AQ96HP8 235 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 PABPC3Q9H361 631 aaKnown RBP12.09□□□□□ -0.47
IRF9-209ENST00000560365 HESX1Q9UBX0 185 aa12.09□□□□□ -0.47
IRF9-209ENST00000560365 TPX2Q9ULW0 747 aaKnown RBP12.09□□□□□ -0.47
IRF9-209ENST00000560365 SMG1Q96Q15 3661 aaKnown RBP12.08□□□□□ -0.48
IRF9-209ENST00000560365 MAPK13O15264 365 aa12.08□□□□□ -0.48
IRF9-209ENST00000560365 TLX3O43711 291 aaPredicted RBP12.08□□□□□ -0.48
IRF9-209ENST00000560365 ASLP04424 464 aa12.08□□□□□ -0.48
IRF9-209ENST00000560365 IGHV4-34P06331 123 aa12.08□□□□□ -0.48
IRF9-209ENST00000560365 PDIA4P13667 645 aaKnown RBP12.08□□□□□ -0.48
IRF9-209ENST00000560365 PLA2G2AP14555 144 aa12.08□□□□□ -0.48
IRF9-209ENST00000560365 SLC11A2P49281 568 aa12.08□□□□□ -0.48
IRF9-209ENST00000560365 ACADVLP49748 655 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms