RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CTAGE3PQ8IX95 158 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 PPM1NQ8N819 430 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 COLGALT1Q8NBJ5 622 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 TTC17Q96AE7 1141 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 LENG1Q96BZ8 264 aaPredicted RBP8.34□□□□□ -1.07
SMAD3-212ENST00000559937 STAMBPL1Q96FJ0 436 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 SERAC1Q96JX3 654 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 TMEM237Q96Q45 408 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 LRRC37BQ96QE4 947 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 TSSK1BQ9BXA7 367 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 TRIM55Q9BYV6 548 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 SENP6Q9GZR1 1112 aaPredicted RBP8.34□□□□□ -1.07
SMAD3-212ENST00000559937 IQCGQ9H095 443 aaKnown RBP8.34□□□□□ -1.07
SMAD3-212ENST00000559937 LRMDAQ9H2I8 198 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 MANSC1Q9H8J5 431 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 PLAC1Q9HBJ0 212 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 SPC25Q9HBM1 224 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 ZFYVE28Q9HCC9 887 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 CSNK1G1Q9HCP0 422 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 CRTAC1Q9NQ79 661 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 DDX43Q9NXZ2 648 aaKnown RBP8.34□□□□□ -1.07
SMAD3-212ENST00000559937 MOCS1Q9NZB8 636 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 SLC17A7Q9P2U7 560 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 RPL26L1Q9UNX3 145 aaKnown RBP8.34□□□□□ -1.07
SMAD3-212ENST00000559937 CHKBQ9Y259 395 aa8.34□□□□□ -1.07
SMAD3-212ENST00000559937 SDR42E2A6NKP2 422 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 AP3B1O00203 1094 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 RNF103O00237 685 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 TRAFD1O14545 582 aaPredicted RBP8.33□□□□□ -1.08
SMAD3-212ENST00000559937 TNPO2O14787 897 aaKnown RBP8.33□□□□□ -1.08
SMAD3-212ENST00000559937 BIRC5O15392 142 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 PSMD3O43242 534 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 DNAJC6O75061 913 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 AVILO75366 819 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 RFPL1O75677 317 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 ATP6V1G2O95670 118 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 CYP11A1P05108 521 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 PYGBP11216 843 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 ODC1P11926 461 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 SKIP12755 728 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 CYBAP13498 195 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 PGAM1P18669 254 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 CYP2B6P20813 491 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 DNAJB2P25686 324 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 HTR7P34969 479 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 SERPINB4P48594 390 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 MNAT1P51948 309 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 ZNF33AQ06730 810 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 NIPAL4Q0D2K0 466 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 FAXCQ5TGI0 409 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 ATG16L1Q676U5 607 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 DSTYKQ6XUX3 929 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 NLRP9Q7RTR0 991 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 TBC1D1Q86TI0 1168 aaPredicted RBP8.33□□□□□ -1.08
SMAD3-212ENST00000559937 IFNL1Q8IU54 200 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 PYROXD2Q8N2H3 581 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 ANKLE1Q8NAG6 615 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 GSTCDQ8NEC7 633 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 SPOCK2Q92563 424 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 CDKL2Q92772 493 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 P2RY11Q96G91 374 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 SMARCD1Q96GM5 515 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 UROC1Q96N76 676 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 SRPK1Q96SB4 655 aaKnown RBP8.33□□□□□ -1.08
SMAD3-212ENST00000559937 VAT1Q99536 393 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 SMOQ99835 787 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 TACO1Q9BSH4 297 aaKnown RBP8.33□□□□□ -1.08
SMAD3-212ENST00000559937 ULBP1Q9BZM6 244 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 MYLK2Q9H1R3 596 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 WDR6Q9NNW5 1121 aaKnown RBP8.33□□□□□ -1.08
SMAD3-212ENST00000559937 SLCO1B3Q9NPD5 702 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 KRT82Q9NSB4 513 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 LNPEPQ9UIQ6 1025 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 FBXW11Q9UKB1 542 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 ADAM28Q9UKQ2 775 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 DSEQ9UL01 958 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 ST3GAL5Q9UNP4 418 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 MTO1Q9Y2Z2 717 aaKnown RBP8.33□□□□□ -1.08
SMAD3-212ENST00000559937 PLLPQ9Y342 182 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 SQORQ9Y6N5 450 aa8.33□□□□□ -1.08
SMAD3-212ENST00000559937 HHLA1C9JL84 531 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 GOLGA8RI6L899 631 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 CLDN5O00501 218 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 NRP1O14786 923 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 CAPN9O14815 690 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 INPPL1O15357 1258 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 BEST1O76090 585 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 MAP3K6O95382 1288 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 FYNP06241 537 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 SLC10A3P09131 477 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
SMAD3-212ENST00000559937 CSH1P0DML2 217 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 CSH2P0DML3 217 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 RARBP10826 455 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 HSPA8P11142 646 aaKnown RBP8.32□□□□□ -1.08
SMAD3-212ENST00000559937 ERCC2P18074 760 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 MX2P20592 715 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 CRHR1P34998 444 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 SERPINB6P35237 376 aa8.32□□□□□ -1.08
SMAD3-212ENST00000559937 MLH1P40692 756 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms