RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 HOXD8P13378 290 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 CRHR1P34998 444 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 TAF6P49848 677 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 RCN2Q14257 317 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 ATG16L1Q676U5 607 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 TRIM68Q6AZZ1 485 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 STRADAQ7RTN6 431 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 APBB1IPQ7Z5R6 666 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 NME8Q8N427 588 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 RNF139Q8WU17 664 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 WDR60Q8WVS4 1066 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 ARNTL2Q8WYA1 636 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 MTBPQ96DY7 904 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 C7orf26Q96N11 449 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 MKS1Q9NXB0 559 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 EMCNQ9ULC0 261 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 RRN3P2A6NIE6 340 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 FAM72CH0Y354 149 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 TREHO43280 583 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 GSRP00390 522 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ALDOAP04075 364 aaKnown RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ACADSBP45954 432 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ERFP50548 548 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ALDH18A1P54886 795 aaKnown RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 NIPAL4Q0D2K0 466 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 SNX17Q15036 470 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 RALGAPA2Q2PPJ7 1873 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 SLC25A52Q3SY17 297 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 FASTKD1Q53R41 847 aaKnown RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ACSBG2Q5FVE4 666 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 PPM1JQ5JR12 505 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 FAM72AQ5TYM5 149 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 FAM72DQ6L9T8 149 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 C4orf22Q6V702 233 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 PACS1Q6VY07 963 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 USP50Q70EL3 339 aaPredicted RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 FAM72BQ86X60 149 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ENDOVQ8N8Q3 282 aaKnown RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 B3GALNT2Q8NCR0 500 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 MS4A4AQ96JQ5 239 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 PRDM12Q9H4Q4 367 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ANLNQ9NQW6 1124 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 KCNK4Q9NYG8 393 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 MAGED2Q9UNF1 606 aaPredicted RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 HBS1LQ9Y450 684 aaKnown RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 M0QYT0 321 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 KCNK1O00180 336 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 XPO1O14980 1071 aaKnown RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 HNRNPCL1O60812 293 aaKnown RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 USP12O75317 370 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 SNNO75324 88 aaPredicted RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 DAB1O75553 588 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ERVK-10P10266 1014 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 YBX3P16989 372 aaKnown RBP eCLIP10.34□□□□□ -0.751e-6■■■□□ 17.7
LRRC28-216ENST00000559819 MLH1P40692 756 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ABL2P42684 1182 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 PTDSS1P48651 473 aaKnown RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 SERPINB9P50453 376 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 CCNG1P51959 295 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 GTF2A2P52657 109 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 WASHC5Q12768 1159 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 PDE1CQ14123 709 aaPredicted RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 UBAP2LQ14157 1087 aaKnown RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 GRB14Q14449 540 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 KRT72Q14CN4 511 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 EFHC1Q5JVL4 640 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 N4BP2L1Q5TBK1 243 aaPredicted RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 KIAA0319Q5VV43 1072 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 STEAP4Q687X5 459 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ATG14Q6ZNE5 492 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 PAQR9Q6ZVX9 377 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ZNF467Q7Z7K2 595 aaPredicted RBP10.34□□□□□ -0.75
LRRC28-216ENST00000559819 CRLF3Q8IUI8 442 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 TRIM42Q8IWZ5 723 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ZNF567Q8N184 647 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 MCUR1Q96AQ8 359 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 PGBD4Q96DM1 585 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 HSFY1Q96LI6 401 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ZNF560Q96MR9 790 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 ZNF778Q96MU6 729 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 PIGVQ9NUD9 493 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 GDAP2Q9NXN4 497 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 GTF2IRD1Q9UHL9 959 aa10.34□□□□□ -0.75
LRRC28-216ENST00000559819 SMIM35A0A1B0GVV1 85 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 SDR42E2A6NKP2 422 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 H3BRJ5 948 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 NRP1O14786 923 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 HUS1O60921 280 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 CD4P01730 458 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 RARBP10826 455 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 YY1P25490 414 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 FDFT1P37268 417 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 MAP3K7CLP57077 242 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 KDSRQ06136 332 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 STX3Q13277 289 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 CRYMQ14894 314 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 RCN1Q15293 331 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 WSCD1Q658N2 575 aa10.33□□□□□ -0.76
LRRC28-216ENST00000559819 LRRC8BQ6P9F7 803 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms