RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 A0A1W2PP55 124 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 LRRIQ3A6PVS8 624 aaPredicted RBP11.27□□□□□ -0.61
TRAF3-207ENST00000559734 YKT6O15498 198 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 SLC28A2O43868 658 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 KRT10P13645 584 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 HOXD9P28356 352 aaPredicted RBP11.27□□□□□ -0.61
TRAF3-207ENST00000559734 CD38P28907 300 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 HLA-FP30511 346 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 ARRB1P49407 418 aaPredicted RBP11.27□□□□□ -0.61
TRAF3-207ENST00000559734 KIF11P52732 1056 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 PCBP4P57723 403 aaKnown RBP11.27□□□□□ -0.61
TRAF3-207ENST00000559734 ZBTB16Q05516 673 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 BNIP3Q12983 259 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 MPPE1Q53F39 396 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 MBLAC2Q68D91 279 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 NCEH1Q6PIU2 408 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 CCDC186Q7Z3E2 898 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 UNC93AQ86WB7 457 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 CRYBG2Q8N1P7 616 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 CPXM2Q8N436 756 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 ZNF248Q8NDW4 579 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 ZNF507Q8TCN5 953 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 PLEKHO2Q8TD55 490 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 GOLGA1Q92805 767 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 TWNKQ96RR1 684 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 HNRNPABQ99729 332 aaKnown RBP11.27□□□□□ -0.61
TRAF3-207ENST00000559734 PABPC3Q9H361 631 aaKnown RBP11.27□□□□□ -0.61
TRAF3-207ENST00000559734 FBXL12Q9NXK8 326 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 GGA2Q9UJY4 613 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 COL5A1P20908 1838 aaPredicted RBP11.27□□□□□ -0.61
TRAF3-207ENST00000559734 CABIN1Q9Y6J0 2220 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 MYH10P35580 1976 aa11.27□□□□□ -0.61
TRAF3-207ENST00000559734 B8ZZF3 427 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 SDC3O75056 442 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 RNASEH2AO75792 299 aaKnown RBP11.26□□□□□ -0.61
TRAF3-207ENST00000559734 VNN1O95497 513 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 C4BPAP04003 597 aaKnown RBP11.26□□□□□ -0.61
TRAF3-207ENST00000559734 PABPC1P11940 636 aaKnown RBP11.26□□□□□ -0.61
TRAF3-207ENST00000559734 CKMT2P17540 419 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 CD58P19256 250 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 PIK3CAP42336 1068 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 INSM1Q01101 510 aaPredicted RBP11.26□□□□□ -0.61
TRAF3-207ENST00000559734 RABEP1Q15276 862 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 FAM173BQ6P4H8 233 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 EPM2AIP1Q7L775 607 aaPredicted RBP11.26□□□□□ -0.61
TRAF3-207ENST00000559734 AHI1Q8N157 1196 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 TSC1Q92574 1164 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 OMDQ99983 421 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRAF3-207ENST00000559734 LRRC27Q9C0I9 530 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 EBF2Q9HAK2 575 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 CLIC5Q9NZA1 410 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 SERGEFQ9UGK8 458 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 PCDHB1Q9Y5F3 818 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 UBE4BO95155 1302 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 PTPRQQ9UMZ3 2332 aa11.26□□□□□ -0.61
TRAF3-207ENST00000559734 PLXNA2O75051 1894 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 LRRC72A6NJI9 287 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 WNT9AO14904 365 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 MID1O15344 667 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 KLK10O43240 276 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 RNASEH1O60930 286 aaKnown RBP11.25□□□□□ -0.61
TRAF3-207ENST00000559734 CD2BP2O95400 341 aaKnown RBP11.25□□□□□ -0.61
TRAF3-207ENST00000559734 MT-CO3P00414 261 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 MPOP05164 745 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 ATP5BP06576 529 aaKnown RBP11.25□□□□□ -0.61
TRAF3-207ENST00000559734 DLDP09622 509 aaKnown RBP11.25□□□□□ -0.61
TRAF3-207ENST00000559734 C6P13671 934 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 POLR2EP19388 210 aaKnown RBP11.25□□□□□ -0.61
TRAF3-207ENST00000559734 ASPAP45381 313 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 HARS2P49590 506 aaKnown RBP11.25□□□□□ -0.61
TRAF3-207ENST00000559734 AP3M2P53677 418 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 GALCP54803 685 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 UCNP55089 124 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 DAB2P98082 770 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 ILKQ13418 452 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 SGSM1Q2NKQ1 1148 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 SLC45A4Q5BKX6 768 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 PRICKLE2Q7Z3G6 844 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 ADIPOR2Q86V24 386 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 DHX40Q8IX18 779 aaKnown RBP11.25□□□□□ -0.61
TRAF3-207ENST00000559734 ZC3H3Q8IXZ2 948 aaKnown RBP11.25□□□□□ -0.61
TRAF3-207ENST00000559734 KCNE4Q8WWG9 221 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 PLD4Q96BZ4 506 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 DHX58Q96C10 678 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 SERAC1Q96JX3 654 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 NT5C1AQ9BXI3 368 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 NEUROG2Q9H2A3 272 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 PNPLA8Q9NP80 782 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 SUN2Q9UH99 717 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 ADAMTS1Q9UHI8 967 aa11.25□□□□□ -0.61
TRAF3-207ENST00000559734 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.25□□□□□ -0.61
TRAF3-207ENST00000559734 TP53BP1Q12888 1972 aaPredicted RBP11.25□□□□□ -0.61
TRAF3-207ENST00000559734 KNL1Q8NG31 2342 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 TLR4O00206 839 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 SIN3BO75182 1162 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 WISP1O95388 367 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 PSMD8P48556 350 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 SGSHP51688 502 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms