RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 MOCS3O95396 460 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 COMTP21964 271 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 HOXC13P31276 330 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 SLC6A4P31645 630 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 HARS2P49590 506 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 MESDQ14696 234 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 DPYSL2Q16555 572 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 IFI16Q16666 785 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 BOLA3Q53S33 107 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 MS4A13Q5J8X5 152 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 ADGRF1Q5T601 910 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 NT5DC3Q86UY8 548 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 BBS7Q8IWZ6 715 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 ATP6V0D2Q8N8Y2 350 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 RPGRIP1Q96KN7 1286 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 GOLPH3Q9H4A6 298 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 TMPRSS4Q9NRS4 437 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 TBC1D14Q9P2M4 693 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 ZNF212Q9UDV6 495 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 GUCA1BQ9UMX6 200 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 ZKSCAN5Q9Y2L8 839 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 HS3ST4Q9Y661 456 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 MACROD2A1Z1Q3 448 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 GOLGA6L9A6NEM1 432 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 DRGXA6NNA5 263 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 APOEP02649 317 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 NOP2P46087 812 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 PEX5P50542 639 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 TAZQ16635 292 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 GAB4Q2WGN9 574 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 ARHGAP29Q52LW3 1261 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 TMEM31Q5JXX7 168 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 ERMARDQ5T6L9 678 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 SND1Q7KZF4 910 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 DENND1CQ8IV53 801 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 SLC44A3Q8N4M1 653 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 RSAD2Q8WXG1 361 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 TSC1Q92574 1164 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 CHFRQ96EP1 664 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 MYEOVQ96EZ4 313 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 KXD1Q9BQD3 176 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 SNRNP25Q9BV90 132 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 MAGEB5Q9BZ81 275 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 LINC00597Q9H2U6 94 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 C11orf16Q9NQ32 467 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 LZTFL1Q9NQ48 299 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 HPS4Q9NQG7 708 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 LIMD1Q9UGP4 676 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 LSM7Q9UK45 103 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 SH3BP1Q9Y3L3 701 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 CHD5Q8TDI0 1954 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 MYO10Q9HD67 2058 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 MUC6Q6W4X9 2439 aa15.34■□□□□ 0.05
SNRPA1-207ENST00000559309 KIAA1549LQ6ZVL6 1849 aa15.33■□□□□ 0.05
SNRPA1-207ENST00000559309 PI4K2BG5E9Z4 385 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 SLC9A3R1O14745 358 aaPredicted RBP15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 PALMO75781 387 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 PENKP01210 267 aaPredicted RBP15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 HMBSP08397 361 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 RARAP10276 462 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 IRF1P10914 325 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 CTNNA2P26232 953 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 L1CAMP32004 1257 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 CTNNA1P35221 906 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 PDGFRLQ15198 375 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 CA9Q16790 459 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 RHBDF2Q6PJF5 856 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 VSIG1Q86XK7 387 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 HES6Q96HZ4 224 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 PRICKLE1Q96MT3 831 aaPredicted RBP15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 SLC2A4RGQ9NR83 387 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 FBXO10Q9UK96 956 aa15.33■□□□□ 0.04
SNRPA1-207ENST00000559309 SYNJ2BP-COX16A0A087WUM0 186 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 GOLGA6L7A0A1B0GV03 622 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 OTOL1A6NHN0 477 aaPredicted RBP15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 C3orf70A6NLC5 250 aaPredicted RBP15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 ZNF487B1APH4 448 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 FAM72CH0Y354 149 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 PSTPIP1O43586 416 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 PRPSAP2O60256 369 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 DESP17661 470 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 TACR2P21452 398 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 SP100P23497 879 aaPredicted RBP15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 IL4RP24394 825 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 HTR7P34969 479 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 CHKAP35790 457 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 HCAR3P49019 387 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 SLC11A2P49281 568 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 ZNF135P52742 658 aaPredicted RBP15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 AUHQ13825 339 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 ARL13BQ3SXY8 428 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 MPP7Q5T2T1 576 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 MEI1Q5TIA1 1274 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 FAM72AQ5TYM5 149 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 FYB2Q5VWT5 728 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 FAM72DQ6L9T8 149 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 FBXL22Q6P050 247 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 C14orf80Q86SX3 495 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 DAAM2Q86T65 1068 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms