RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 AFF1P51825 1210 aaKnown RBP11.63□□□□□ -0.55
CLPX-204ENST00000559152 TPI1P60174 286 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 PRKCZQ05513 592 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 IFRD2Q12894 506 aaPredicted RBP11.63□□□□□ -0.55
CLPX-204ENST00000559152 DNAJC3Q13217 504 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 FYB2Q5VWT5 728 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 PM20D1Q6GTS8 502 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 DCLRE1AQ6PJP8 1040 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 PPM1NQ8N819 430 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 RNF169Q8NCN4 708 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 CCNYQ8ND76 341 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 SMC1BQ8NDV3 1235 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 MYLPFQ96A32 169 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 KCNK16Q96T55 309 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 EPAS1Q99814 870 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 ADAM2Q99965 735 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 COLEC11Q9BWP8 271 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 MAGEB5Q9BZ81 275 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 IQCGQ9H095 443 aaKnown RBP11.63□□□□□ -0.55
CLPX-204ENST00000559152 WDCPQ9H6R7 721 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 DDIT4Q9NX09 232 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 IGSF9Q9P2J2 1179 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 HHLA1C9JL84 531 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 DCLK1O15075 740 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 EDF1O60869 148 aaKnown RBP11.63□□□□□ -0.55
CLPX-204ENST00000559152 POMCP01189 267 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 VAV1P15498 845 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 TYMPP19971 482 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 SERPINB6P35237 376 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 TSPY1Q01534 308 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 FAAP100Q0VG06 881 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 NAB1Q13506 487 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 LPIN1Q14693 890 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 SETDB1Q15047 1291 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 CCSAPQ6IQ19 270 aaPredicted RBP11.63□□□□□ -0.55
CLPX-204ENST00000559152 UNC5AQ6ZN44 842 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 DENND5BQ6ZUT9 1274 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 HFE2Q6ZVN8 426 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 ZNF534Q76KX8 674 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 RNF180Q86T96 592 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 AGGF1Q8N302 714 aaeCLIP11.63□□□□□ -0.554e-7■□□□□ 8.8
CLPX-204ENST00000559152 CCDC63Q8NA47 563 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 ZNF398Q8TD17 642 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 ZNF75CPQ92670 426 aaPredicted RBP11.63□□□□□ -0.55
CLPX-204ENST00000559152 CDKL2Q92772 493 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 STAMBPL1Q96FJ0 436 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 LGMNQ99538 433 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 ARHGAP39Q9C0H5 1083 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 WDR6Q9NNW5 1121 aaKnown RBP11.63□□□□□ -0.55
CLPX-204ENST00000559152 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.63□□□□□ -0.55
CLPX-204ENST00000559152 USH1CQ9Y6N9 552 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 FAM159BA6NKW6 160 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 INPPL1O15357 1258 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 C1QAP02745 245 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 CXCR3P49682 368 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 PITX1P78337 314 aaPredicted RBP11.62□□□□□ -0.55
CLPX-204ENST00000559152 SEMA3BQ13214 749 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 ITGA7Q13683 1181 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 PACS2Q86VP3 889 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 CHSY1Q86X52 802 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 TRIM42Q8IWZ5 723 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 TTC17Q96AE7 1141 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 VAT1Q99536 393 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 PRDM12Q9H4Q4 367 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 CACNG4Q9UBN1 327 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 BRCA2P51587 3418 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 ERI2A8K979 691 aaKnown RBP11.62□□□□□ -0.55
CLPX-204ENST00000559152 COPEO14579 308 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 DCTN3O75935 186 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 EOMESO95936 686 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
CLPX-204ENST00000559152 TROVE2P10155 538 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLPX-204ENST00000559152 PRKAR2AP13861 404 aaKnown RBP11.62□□□□□ -0.55
CLPX-204ENST00000559152 ERCC2P18074 760 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 IGFBP6P24592 240 aaPredicted RBP11.62□□□□□ -0.55
CLPX-204ENST00000559152 NEK3P51956 506 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 GALNTL6Q49A17 601 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 STEAP4Q687X5 459 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 OVOS1Q6IE37 1185 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 ZNF449Q6P9G9 518 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 C4orf50Q6ZRC1 276 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 FAM47EQ6ZV65 393 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 PRPF39Q86UA1 669 aaKnown RBP11.62□□□□□ -0.55
CLPX-204ENST00000559152 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
CLPX-204ENST00000559152 RSPH1Q8WYR4 309 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 RTP3Q9BQQ7 232 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 MANSC1Q9H8J5 431 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 ABCF3Q9NUQ8 709 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 MKS1Q9NXB0 559 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 TRHDEQ9UKU6 1024 aa11.62□□□□□ -0.55
CLPX-204ENST00000559152 TRIM49D1C9J1S8 452 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 AP3B1O00203 1094 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 MGEA5O60502 916 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 RASSF9O75901 435 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 ATP5HO75947 161 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 ALDH1A2O94788 518 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 PYGBP11216 843 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 PGAM1P18669 254 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 ADRA1DP25100 572 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 HTR7P34969 479 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms