RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 HOXD9P28356 352 aaPredicted RBP11.3□□□□□ -0.6
TPM1-217ENST00000559108 MAGEA1P43355 309 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 TAS2R40P59535 323 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 RPS24P62847 133 aaKnown RBP11.3□□□□□ -0.6
TPM1-217ENST00000559108 FZD5Q13467 585 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 MLF2Q15773 248 aaPredicted RBP11.3□□□□□ -0.6
TPM1-217ENST00000559108 ITPRIPL2Q3MIP1 535 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 RNF43Q68DV7 783 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 PPP1R2P3Q6NXS1 205 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 CC2D1AQ6P1N0 951 aaPredicted RBP11.3□□□□□ -0.6
TPM1-217ENST00000559108 DCUN1D2Q6PH85 259 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 TRIM67Q6ZTA4 783 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 TPRG1Q6ZUI0 275 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 STRADAQ7RTN6 431 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 ETFBKMTQ8IXQ9 262 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 UBALD2Q8IYN6 164 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 SIX5Q8N196 739 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 CFAP52Q8N1V2 620 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 CPXM2Q8N436 756 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 KIAA1958Q8N8K9 716 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 NAT16Q8N8M0 369 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 OR52K2Q8NGK3 314 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 ZNF564Q8TBZ8 553 aaPredicted RBP11.3□□□□□ -0.6
TPM1-217ENST00000559108 TRIM11Q96F44 468 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 TKTL2Q9H0I9 626 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.3□□□□□ -0.6
TPM1-217ENST00000559108 THG1LQ9NWX6 298 aaKnown RBP11.3□□□□□ -0.6
TPM1-217ENST00000559108 MARK1Q9P0L2 795 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 ANAPC7Q9UJX3 599 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 CUL9Q8IWT3 2517 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 NEDD8-MDP1E9PL57 170 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 HOXC11O43248 304 aaPredicted RBP11.29□□□□□ -0.6
TPM1-217ENST00000559108 NFATC1O95644 943 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 ADH5P11766 374 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 TACR2P21452 398 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 TARSP26639 723 aaKnown RBP11.29□□□□□ -0.6
TPM1-217ENST00000559108 MIPP30301 263 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 HOXC13P31276 330 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 CCR1P32246 355 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 ARHGAP25P42331 645 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 HARS2P49590 506 aaKnown RBP11.29□□□□□ -0.6
TPM1-217ENST00000559108 GSDMDP57764 484 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 SLC25A11Q02978 314 aaKnown RBP11.29□□□□□ -0.6
TPM1-217ENST00000559108 SIGLEC14Q08ET2 396 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 TCEAL1Q15170 157 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 ADGRF1Q5T601 910 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 MANEALQ5VSG8 457 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 NUGGCQ68CJ6 796 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 FSTL4Q6MZW2 842 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 FBXL22Q6P050 247 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 SLC35G2Q8TBE7 412 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 FNIP1Q8TF40 1166 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 CTNNBL1Q8WYA6 563 aaPredicted RBP11.29□□□□□ -0.6
TPM1-217ENST00000559108 ATP2A3Q93084 1043 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 AZIN2Q96A70 460 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 LMLNQ96KR4 655 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 RBM12Q9NTZ6 932 aaKnown RBP11.29□□□□□ -0.6
TPM1-217ENST00000559108 RRN3Q9NYV6 651 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 CTTNBP2NLQ9P2B4 639 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 TBC1D14Q9P2M4 693 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 WNT16Q9UBV4 365 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 ZNF212Q9UDV6 495 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 LSM7Q9UK45 103 aaKnown RBP11.29□□□□□ -0.6
TPM1-217ENST00000559108 HYOU1Q9Y4L1 999 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 SCINQ9Y6U3 715 aa11.29□□□□□ -0.6
TPM1-217ENST00000559108 SLC9A3R1O14745 358 aaPredicted RBP11.28□□□□□ -0.6
TPM1-217ENST00000559108 PI15O43692 258 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 CNTN5O94779 1100 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 LATS1O95835 1130 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 APOEP02649 317 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 CISD3P0C7P0 127 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 TYRP14679 529 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 GLULP15104 373 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 GBP1P32455 592 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 ADRA1BP35368 520 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 CYLC1P35663 651 aaPredicted RBP11.28□□□□□ -0.6
TPM1-217ENST00000559108 NUMBP49757 651 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 KPNA1P52294 538 aaPredicted RBP11.28□□□□□ -0.6
TPM1-217ENST00000559108 STARD6P59095 220 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 KDSRQ06136 332 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 SEMA3BQ13214 749 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 AUHQ13825 339 aaKnown RBP11.28□□□□□ -0.6
TPM1-217ENST00000559108 PON2Q15165 354 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 ATP13A4Q4VNC1 1196 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 ALFQ53S48 1182 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 BRMS1LQ5PSV4 323 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 PKN3Q6P5Z2 889 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 CHSY1Q86X52 802 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 UNC45BQ8IWX7 931 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 LGI2Q8N0V4 545 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 CPA6Q8N4T0 437 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 NIPA2Q8N8Q9 360 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 CSGALNACT1Q8TDX6 532 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 RFFLQ8WZ73 363 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 NTAN1Q96AB6 310 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 OTUB2Q96DC9 234 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 BTN2A3PQ96KV6 586 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 SNRNP25Q9BV90 132 aaKnown RBP11.28□□□□□ -0.6
TPM1-217ENST00000559108 BBS2Q9BXC9 721 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 DCLK3Q9C098 648 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms