RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 STX17P56962 302 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 FAM193AP78312 1265 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 GFPT1Q06210 699 aaPredicted RBP12.02□□□□□ -0.49
CASC4-205ENST00000558735 KCNH2Q12809 1159 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 ZNF234Q14588 700 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 MPPE1Q53F39 396 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 ADGRF1Q5T601 910 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 ARHGEF19Q8IW93 802 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 TRIM59Q8IWR1 403 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 SIX6OS1Q8N1H7 587 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 HDDC3Q8N4P3 179 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 CHCHD4Q8N4Q1 142 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 TRIML1Q8N9V2 468 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 SORCS1Q8WY21 1168 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 TMA16Q96EY4 203 aaKnown RBP12.02□□□□□ -0.49
CASC4-205ENST00000558735 KREMEN1Q96MU8 473 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 SRRTQ9BXP5 876 aaKnown RBP12.02□□□□□ -0.49
CASC4-205ENST00000558735 PRDM16Q9HAZ2 1276 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 ITM2CQ9NQX7 267 aa12.02□□□□□ -0.49
CASC4-205ENST00000558735 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.02□□□□□ -0.49
CASC4-205ENST00000558735 ATXN2Q99700 1313 aaKnown RBP12.02□□□□□ -0.49
CASC4-205ENST00000558735 KCNJ18B7U540 433 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 MSI1O43347 362 aaKnown RBP12.01□□□□□ -0.49
CASC4-205ENST00000558735 OPHN1O60890 802 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 GJB3O75712 270 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 CFIP05156 583 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 FYNP06241 537 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 HOXD9P28356 352 aaPredicted RBP12.01□□□□□ -0.49
CASC4-205ENST00000558735 HLA-FP30511 346 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 MARSP56192 900 aaKnown RBP12.01□□□□□ -0.49
CASC4-205ENST00000558735 MSANTD2Q6P1R3 559 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 KIAA1324Q6UXG2 1013 aaKnown RBP12.01□□□□□ -0.49
CASC4-205ENST00000558735 ANKS1BQ7Z6G8 1248 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 KIAA0907Q7Z7F0 614 aaPredicted RBP12.01□□□□□ -0.49
CASC4-205ENST00000558735 PDZD3Q86UT5 571 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 TMPRSS6Q8IU80 811 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 CLEC4CQ8WTT0 213 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 UCMAQ8WVF2 138 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 ADAMTS14Q8WXS8 1223 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 IRGQQ8WZA9 623 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 HSFY1Q96LI6 401 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 HSPA12BQ96MM6 686 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 WSB2Q9NYS7 404 aaPredicted RBP12.01□□□□□ -0.49
CASC4-205ENST00000558735 CNTN6Q9UQ52 1028 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 ADAMTS20P59510 1910 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 PCDH15Q96QU1 1955 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 CELSR3Q9NYQ7 3312 aa12.01□□□□□ -0.49
CASC4-205ENST00000558735 GOLGA6L7A0A1B0GV03 622 aa12□□□□□ -0.49
CASC4-205ENST00000558735 BICDL2A1A5D9 508 aa12□□□□□ -0.49
CASC4-205ENST00000558735 ARHGAP33O14559 1287 aa12□□□□□ -0.49
CASC4-205ENST00000558735 NDUFS2O75306 463 aa12□□□□□ -0.49
CASC4-205ENST00000558735 IGLV3-27P01718 113 aa12□□□□□ -0.49
CASC4-205ENST00000558735 NCAM1P13591 858 aa12□□□□□ -0.49
CASC4-205ENST00000558735 PRKCHP24723 683 aa12□□□□□ -0.49
CASC4-205ENST00000558735 MAOBP27338 520 aa12□□□□□ -0.49
CASC4-205ENST00000558735 CD6P30203 668 aa12□□□□□ -0.49
CASC4-205ENST00000558735 GPD2P43304 727 aa12□□□□□ -0.49
CASC4-205ENST00000558735 RPL34P49207 117 aaKnown RBP12□□□□□ -0.49
CASC4-205ENST00000558735 SGSHP51688 502 aa12□□□□□ -0.49
CASC4-205ENST00000558735 COPAP53621 1224 aa12□□□□□ -0.49
CASC4-205ENST00000558735 GCNT1Q02742 428 aa12□□□□□ -0.49
CASC4-205ENST00000558735 SCAPQ12770 1279 aa12□□□□□ -0.49
CASC4-205ENST00000558735 CETN1Q12798 172 aa12□□□□□ -0.49
CASC4-205ENST00000558735 STARD3Q14849 445 aa12□□□□□ -0.49
CASC4-205ENST00000558735 EIF4HQ15056 248 aaKnown RBP12□□□□□ -0.49
CASC4-205ENST00000558735 STILQ15468 1287 aa12□□□□□ -0.49
CASC4-205ENST00000558735 CCNI2Q6ZMN8 369 aaPredicted RBP12□□□□□ -0.49
CASC4-205ENST00000558735 ADIPOR2Q86V24 386 aa12□□□□□ -0.49
CASC4-205ENST00000558735 SCUBE3Q8IX30 993 aa12□□□□□ -0.49
CASC4-205ENST00000558735 MINDY1Q8N5J2 469 aa12□□□□□ -0.49
CASC4-205ENST00000558735 TOE1Q96GM8 510 aaKnown RBP12□□□□□ -0.49
CASC4-205ENST00000558735 CIPCQ9C0C6 399 aa12□□□□□ -0.49
CASC4-205ENST00000558735 USP36Q9P275 1121 aaKnown RBP12□□□□□ -0.49
CASC4-205ENST00000558735 DKK4Q9UBT3 224 aa12□□□□□ -0.49
CASC4-205ENST00000558735 CTNND2Q9UQB3 1225 aa12□□□□□ -0.49
CASC4-205ENST00000558735 M0QYV0 167 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 SYNCRIPO60506 623 aaKnown RBP11.99□□□□□ -0.49
CASC4-205ENST00000558735 LATS1O95835 1130 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 GNA14O95837 355 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 AFPP02771 609 aaKnown RBP11.99□□□□□ -0.49
CASC4-205ENST00000558735 LTFP02788 710 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 HLA-EP13747 358 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 SLC6A4P31645 630 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 TPMTP51580 245 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 ATXN3P54252 364 aaPredicted RBP11.99□□□□□ -0.49
CASC4-205ENST00000558735 PAK1Q13153 545 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 PIK3R6Q5UE93 754 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 RFWD3Q6PCD5 774 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 GLRX5Q86SX6 157 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 UNC45BQ8IWX7 931 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 RGL4Q8IZJ4 473 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 OR2I1PQ8NGU4 316 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 CYB5D2Q8WUJ1 264 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 DNASE2BQ8WZ79 361 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 AZIN2Q96A70 460 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 COL26A1Q96A83 441 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 SIPA1Q96FS4 1042 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 MED15Q96RN5 788 aa11.99□□□□□ -0.49
CASC4-205ENST00000558735 GTPBP2Q9BX10 602 aaKnown RBP11.99□□□□□ -0.49
CASC4-205ENST00000558735 GPR174Q9BXC1 333 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms