RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 MPPE1Q53F39 396 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 KCNT1Q5JUK3 1230 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 ARHGAP40Q5TG30 622 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 CCDC73Q6ZRK6 1079 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 USP30Q70CQ3 517 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 UNC93AQ86WB7 457 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 CACUL1Q86Y37 369 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 FMNL3Q8IVF7 1028 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 DHX40Q8IX18 779 aaKnown RBP5.43□□□□□ -1.54
SPG11-208ENST00000558155 CPXM2Q8N436 756 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 OXR1Q8N573 874 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 XXYLT1Q8NBI6 393 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 ZMIZ2Q8NF64 920 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 SLC2A14Q8TDB8 520 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 WFIKKN2Q8TEU8 576 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 SORCS1Q8WY21 1168 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 RFFLQ8WZ73 363 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 MED8Q96G25 268 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 EPSTI1Q96J88 318 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 CGRRF1Q99675 332 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 DPH1Q9BZG8 443 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 LRRC27Q9C0I9 530 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 DNAI2Q9GZS0 605 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 VRTNQ9H8Y1 702 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 GDF3Q9NR23 364 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 AASDHPPTQ9NRN7 309 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.43□□□□□ -1.54
SPG11-208ENST00000558155 OSER1Q9NX31 292 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 CLIC5Q9NZA1 410 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 ADAMTS1Q9UHI8 967 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 NAGPAQ9UK23 515 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 NUDT5Q9UKK9 219 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 STRIP2Q9ULQ0 834 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 TPX2Q9ULW0 747 aaKnown RBP5.43□□□□□ -1.54
SPG11-208ENST00000558155 SCML1Q9UN30 329 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 PCDHA5Q9Y5H7 936 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 SLCO1B1Q9Y6L6 691 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 LAMA1P25391 3075 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 NAV2Q8IVL1 2488 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 MUC22E2RYF6 1773 aaPredicted RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 ARID1BQ8NFD5 2236 aaPredicted RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 FRMD3A2A2Y4 597 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 FAM47DPA6NHR8 397 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 TLR4O00206 839 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 CBX4O00257 560 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 MDM4O15151 490 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 CYP26A1O43174 497 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 KLK10O43240 276 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 STX6O43752 255 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 MAGEC1O60732 1142 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 NTRK1P04629 796 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 RPN1P04843 607 aaKnown RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 IGHV4-34P06331 123 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 HMBSP08397 361 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 CCDC130P13994 396 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 POLR2EP19388 210 aaKnown RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 ACP1P24666 158 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 ADORA2BP29275 332 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 STAT6P42226 847 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 RXRGP48443 463 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 HARS2P49590 506 aaKnown RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 CSRP3P50461 194 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 CCR5P51681 352 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 GALCP54803 685 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 CLDN6P56747 220 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 ZNF445P59923 1031 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 ERVPABLB-1P60509 514 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 INSM1Q01101 510 aaPredicted RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 CYP24A1Q07973 514 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 VAC14Q08AM6 782 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 BNIP3Q12983 259 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 BIRC3Q13489 604 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 LY6DQ14210 128 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 SHBQ15464 509 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 SGSM1Q2NKQ1 1148 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 ZNF699Q32M78 642 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 HS1BP3Q53T59 392 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 TMEM215Q68D42 235 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 ZNF776Q68DI1 518 aaPredicted RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 LAYNQ6UX15 382 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 KDM7AQ6ZMT4 941 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 CHST9Q7L1S5 443 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 BRAPQ7Z569 592 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 ERICH1Q86X53 443 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 LURAP1LQ8IV03 231 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 DENND1CQ8IV53 801 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 ARHGAP18Q8N392 663 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 DCBLD1Q8N8Z6 715 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 RBBP8NLQ8NC74 664 aaPredicted RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 ZNF507Q8TCN5 953 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 KCNE4Q8WWG9 221 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 TMA16Q96EY4 203 aaKnown RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 CYFIP2Q96F07 1278 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 NAF1Q96HR8 494 aaKnown RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 HNRNPABQ99729 332 aaKnown RBP5.42□□□□□ -1.54
SPG11-208ENST00000558155 ORAI3Q9BRQ5 295 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 PANK2Q9BZ23 570 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 FAM117AQ9C073 453 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 XYLT2Q9H1B5 865 aa5.42□□□□□ -1.54
SPG11-208ENST00000558155 TMEM245Q9H330 911 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms