RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SMPD4Q9NXE4 827 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 SMARCAL1Q9NZC9 954 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 STIM2Q9P246 746 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 LSM7Q9UK45 103 aaKnown RBP17.45■□□□□ 0.38
SNX1-203ENST00000558040 ARHGAP26Q9UNA1 814 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 CCDC188H7C350 402 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 I6L893 689 aaPredicted RBP17.44■□□□□ 0.38
SNX1-203ENST00000558040 DAPK3O43293 454 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 SLU7O95391 586 aaKnown RBP17.44■□□□□ 0.38
SNX1-203ENST00000558040 IRF1P10914 325 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 CORO1AP31146 461 aaKnown RBP17.44■□□□□ 0.38
SNX1-203ENST00000558040 KCNQ1P51787 676 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 MLLT6P55198 1093 aaPredicted RBP17.44■□□□□ 0.38
SNX1-203ENST00000558040 MMRN1Q13201 1228 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 ADGRE1Q14246 886 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 STXBP5Q5T5C0 1151 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 SYCE2Q6PIF2 218 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 LRRC31Q6UY01 552 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 RFX8Q6ZV50 586 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 BBS12Q6ZW61 710 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 ANKS1BQ7Z6G8 1248 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 SPATA4Q8NEY3 305 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 ZFRQ96KR1 1074 aaKnown RBP17.44■□□□□ 0.38
SNX1-203ENST00000558040 ADAM7Q9H2U9 754 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 GKN1Q9NS71 199 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 HOMER3Q9NSC5 361 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 CLDND1Q9NY35 253 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 CWC15Q9P013 229 aaKnown RBP17.44■□□□□ 0.38
SNX1-203ENST00000558040 HS3ST4Q9Y661 456 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 CHD9Q3L8U1 2897 aa17.44■□□□□ 0.38
SNX1-203ENST00000558040 RIOK3O14730 519 aaKnown RBP17.43■□□□□ 0.38
SNX1-203ENST00000558040 APOL1O14791 398 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 ACSL4O60488 711 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 CST8O60676 142 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 GOT1P17174 413 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 CEBPBP17676 345 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 FSHRP23945 695 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 IL4RP24394 825 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 KLF1Q13351 362 aaPredicted RBP17.43■□□□□ 0.38
SNX1-203ENST00000558040 LLGL1Q15334 1064 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 CTC1Q2NKJ3 1217 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 MS4A13Q5J8X5 152 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 ATAT1Q5SQI0 421 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 ADAT2Q7Z6V5 191 aaKnown RBP17.43■□□□□ 0.38
SNX1-203ENST00000558040 CHSY1Q86X52 802 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 TTC13Q8NBP0 860 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 TBC1D31Q96DN5 1066 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 LRCH3Q96II8 777 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 FAM161BQ96MY7 647 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 APOL5Q9BWW9 433 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 XPO7Q9UIA9 1087 aaKnown RBP17.43■□□□□ 0.38
SNX1-203ENST00000558040 ZNF510Q9Y2H8 683 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 SH3BP1Q9Y3L3 701 aa17.43■□□□□ 0.38
SNX1-203ENST00000558040 E9PAM4 449 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 FAM72CH0Y354 149 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 NRG2O14511 850 aaPredicted RBP17.42■□□□□ 0.38
SNX1-203ENST00000558040 FGF10O15520 208 aaPredicted RBP17.42■□□□□ 0.38
SNX1-203ENST00000558040 LRIG2O94898 1065 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 TGM2P21980 687 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 EPHB2P29323 1055 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 DYNLT1P63172 113 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 FAM72AQ5TYM5 149 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 PIK3R6Q5UE93 754 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 SLC9A4Q6AI14 798 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 FAM72DQ6L9T8 149 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 GPR153Q6NV75 609 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 EP400NLQ6ZTU2 488 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 FAM72BQ86X60 149 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 DENND1CQ8IV53 801 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 MICALL1Q8N3F8 863 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 PCDH19Q8TAB3 1148 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 ING5Q8WYH8 240 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 PABPC5Q96DU9 382 aaKnown RBP17.42■□□□□ 0.38
SNX1-203ENST00000558040 RIPOR3Q96MK2 946 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 HERPUD2Q9BSE4 406 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 AP1M1Q9BXS5 423 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 FRMD8P1Q9BZ68 369 aaPredicted RBP17.42■□□□□ 0.38
SNX1-203ENST00000558040 MAGEB5Q9BZ81 275 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 CATSPERBQ9H7T0 1116 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 ARHGEF4Q9NR80 690 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 DONSONQ9NYP3 566 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 CLEC1BQ9P126 229 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 SNX10Q9Y5X0 201 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 CHD7Q9P2D1 2997 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 MYO9BQ13459 2157 aa17.42■□□□□ 0.38
SNX1-203ENST00000558040 RANBP2P49792 3224 aaKnown RBP17.42■□□□□ 0.38
SNX1-203ENST00000558040 TCRBV7S2A1N4TA0A589 114 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 F5H5T6 163 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 APOC4-APOC2K7ER74 178 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 TBX10O75333 385 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 APOC2P02655 101 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 WEE1P30291 646 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 HOXC13P31276 330 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 TUBB4BP68371 445 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 AUHQ13825 339 aaKnown RBP17.41■□□□□ 0.38
SNX1-203ENST00000558040 DPYSQ14117 519 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 COL19A1Q14993 1142 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 MANEALQ5VSG8 457 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 RAP1GAP2Q684P5 730 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 RWDD4Q6NW29 188 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms