RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 CYB5D2Q8WUJ1 264 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 KBTBD7Q8WVZ9 684 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 OVCA2Q8WZ82 227 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 FAM84AQ96KN4 292 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 KLF16Q9BXK1 252 aaPredicted RBP9.9□□□□□ -0.82
NEDD1-211ENST00000557454 TMEM245Q9H330 911 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 PABPC3Q9H361 631 aaKnown RBP9.9□□□□□ -0.82
NEDD1-211ENST00000557454 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 PRSS16Q9NQE7 514 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 FBXL12Q9NXK8 326 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 SEL1LQ9UBV2 794 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 TUBD1Q9UJT1 453 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 CDH9Q9ULB4 789 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 CLEC4EQ9ULY5 219 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 NCKAP1Q9Y2A7 1128 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 PCDHGA7Q9Y5G6 932 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 A0A087X0B3 334 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 CCDC187A0A096LP49 1063 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 LRRC72A6NJI9 287 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 CASC3O15234 703 aaKnown RBP9.89□□□□□ -0.83
NEDD1-211ENST00000557454 TLR5O60602 858 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 TBX18O95935 607 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 PIGRP01833 764 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 PDGFRBP09619 1106 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 OR52Z1P0C646 297 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 RPS6KB1P23443 525 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 PGFP49763 221 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 CCR5P51681 352 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 STK3Q13188 491 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 E2F5Q15329 346 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 MAPRE1Q15691 268 aaKnown RBP9.89□□□□□ -0.83
NEDD1-211ENST00000557454 SNX30Q5VWJ9 437 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 NAPEPLDQ6IQ20 393 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 USP30Q70CQ3 517 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 CCDC83Q8IWF9 413 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 NUP93Q8N1F7 819 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 C1orf127Q8N9H9 656 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 MFSD2AQ8NA29 543 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 C9orf43Q8TAL5 461 aaPredicted RBP9.89□□□□□ -0.83
NEDD1-211ENST00000557454 MYCBPAPQ8TBZ2 947 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 GTF3C6Q969F1 213 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 ZNF518BQ9C0D4 1074 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 FBRSQ9HAH7 460 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 GDAP2Q9NXN4 497 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 ACSL6Q9UKU0 697 aa9.89□□□□□ -0.83
NEDD1-211ENST00000557454 A0A1W2PP55 124 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 C10orf142B7Z368 130 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 TISP43B9A030 160 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 PLD2O14939 933 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 RTN3O95197 1032 aaPredicted RBP9.88□□□□□ -0.83
NEDD1-211ENST00000557454 PRKCGP05129 697 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 ZDHHC11BP0C7U3 371 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 ALPPL2P10696 532 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 GUCY2CP25092 1073 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 NCKAP1LP55160 1127 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 WNT7BP56706 349 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 PPP2CBP62714 309 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 PPP2CAP67775 309 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 TFAMQ00059 246 aaKnown RBP9.88□□□□□ -0.83
NEDD1-211ENST00000557454 GOLGA8FQ08AF8 430 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 GOLGA8DPQ0D2H9 430 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 CDKN3Q16667 212 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 GUSBP11Q6P575 273 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 CPLX2Q6PUV4 134 aaKnown RBP9.88□□□□□ -0.83
NEDD1-211ENST00000557454 Q6ZNB5 142 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 RSRC2Q7L4I2 434 aaKnown RBP9.88□□□□□ -0.83
NEDD1-211ENST00000557454 HS2ST1Q7LGA3 356 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 LRRC52Q8N7C0 313 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 GOLGA1Q92805 767 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 NEUROG2Q9H2A3 272 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 USP29Q9HBJ7 922 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 BRMS1Q9HCU9 246 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 SEPT10Q9P0V9 454 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 APCP25054 2843 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 CCDC168Q8NDH2 2452 aa9.88□□□□□ -0.83
NEDD1-211ENST00000557454 CPED1A4D0V7 1026 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 CLDN5O00501 218 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 MDM4O15151 490 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 RNASEH2AO75792 299 aaKnown RBP9.87□□□□□ -0.83
NEDD1-211ENST00000557454 RARGP13631 454 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 HGFP14210 728 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 SLC5A3P53794 718 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 EHHADHQ08426 723 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 TOB2Q14106 344 aaPredicted RBP9.87□□□□□ -0.83
NEDD1-211ENST00000557454 EFL1Q7Z2Z2 1120 aaKnown RBP9.87□□□□□ -0.83
NEDD1-211ENST00000557454 KCNK18Q7Z418 384 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 CXorf38Q8TB03 319 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 SNX29Q8TEQ0 813 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 TIPINQ9BVW5 301 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 MTG2Q9H4K7 406 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 EVA1BQ9NVM1 165 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 CUEDC1Q9NWM3 386 aaPredicted RBP9.87□□□□□ -0.83
NEDD1-211ENST00000557454 NLGN3Q9NZ94 848 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 ORC3Q9UBD5 711 aaPredicted RBP9.87□□□□□ -0.83
NEDD1-211ENST00000557454 DKK3Q9UBP4 350 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 DNM3Q9UQ16 869 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 CA5BQ9Y2D0 317 aa9.87□□□□□ -0.83
NEDD1-211ENST00000557454 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.86□□□□□ -0.83
NEDD1-211ENST00000557454 H0YCG3 227 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 MID1O15344 667 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms