RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 RALAP11233 206 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 TXLNAP40222 546 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 C21orf59P57076 290 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 CEBPZQ03701 1054 aaKnown RBP13.12□□□□□ -0.31
PSEN1-221ENST00000557293 TRIP4Q15650 581 aaPredicted RBP13.12□□□□□ -0.31
PSEN1-221ENST00000557293 SGSM1Q2NKQ1 1148 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 PKDCCQ504Y2 493 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 FNDC3BQ53EP0 1204 aaKnown RBP13.12□□□□□ -0.31
PSEN1-221ENST00000557293 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 C1orf220Q5T0J3 134 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 SFMBT2Q5VUG0 894 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 ADAT2Q7Z6V5 191 aaKnown RBP13.12□□□□□ -0.31
PSEN1-221ENST00000557293 DCBLD1Q8N8Z6 715 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 WFDC5Q8TCV5 224 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 RSPH9Q9H1X1 276 aaPredicted RBP13.12□□□□□ -0.31
PSEN1-221ENST00000557293 DMAC2Q9NW81 257 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 MARCH2Q9P0N8 246 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 MORC2Q9Y6X9 1032 aaPredicted RBP13.12□□□□□ -0.31
PSEN1-221ENST00000557293 TP53BP1Q12888 1972 aaPredicted RBP13.12□□□□□ -0.31
PSEN1-221ENST00000557293 ATMQ13315 3056 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 HECTD1Q9ULT8 2610 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 SLC12A8A0AV02 714 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 B8ZZF3 427 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 CYBBP04839 570 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 GLDCP23378 1020 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 CD38P28907 300 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 EPHA8P29322 1005 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-221ENST00000557293 ACTN2P35609 894 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 RXRGP48443 463 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 AP3M2P53677 418 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 INSM1Q01101 510 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-221ENST00000557293 INCA1Q0VD86 236 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 SLC39A14Q15043 492 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 ZACNQ401N2 412 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 MPPE1Q53F39 396 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 MBLAC2Q68D91 279 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 NCEH1Q6PIU2 408 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 USP30Q70CQ3 517 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 SPATS2Q86XZ4 545 aaKnown RBP13.11□□□□□ -0.31
PSEN1-221ENST00000557293 WFIKKN2Q8TEU8 576 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 TTC9Q92623 222 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 HIC2Q96JB3 615 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 LMLNQ96KR4 655 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 ARID3AQ99856 593 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 DUSP16Q9BY84 665 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 NEUROG2Q9H2A3 272 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 TNMDQ9H2S6 317 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 PABPC3Q9H361 631 aaKnown RBP13.11□□□□□ -0.31
PSEN1-221ENST00000557293 CLMPQ9H6B4 373 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 FBRSQ9HAH7 460 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 ABCB8Q9NUT2 735 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 STOML2Q9UJZ1 356 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 PLA2G4CQ9UP65 541 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
PSEN1-221ENST00000557293 ARHGAP6O43182 974 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 EXOC3O60645 756 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 RPN1P04843 607 aaKnown RBP13.1□□□□□ -0.31
PSEN1-221ENST00000557293 DLDP09622 509 aaKnown RBP13.1□□□□□ -0.31
PSEN1-221ENST00000557293 CKMT2P17540 419 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 ABCB4P21439 1286 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 CASP1P29466 404 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 SGSHP51688 502 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 NXPH1P58417 271 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 RHDQ02161 417 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 ARID5AQ03989 594 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 ILKQ13418 452 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 LY6DQ14210 128 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 RABEP1Q15276 862 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 TAF1BQ53T94 588 aaPredicted RBP13.1□□□□□ -0.31
PSEN1-221ENST00000557293 RAB41Q5JT25 222 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 PPP1R26Q5T8A7 1209 aaPredicted RBP13.1□□□□□ -0.31
PSEN1-221ENST00000557293 ZNF776Q68DI1 518 aaPredicted RBP13.1□□□□□ -0.31
PSEN1-221ENST00000557293 SV2AQ7L0J3 742 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 BHLHA9Q7RTU4 235 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 TAF4BQ92750 862 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 TMA16Q96EY4 203 aaKnown RBP13.1□□□□□ -0.31
PSEN1-221ENST00000557293 USP28Q96RU2 1077 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 CDK5RAP1Q96SZ6 601 aaKnown RBP13.1□□□□□ -0.31
PSEN1-221ENST00000557293 C7orf25Q9BPX7 421 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 APOBEC3GQ9HC16 384 aaKnown RBP13.1□□□□□ -0.31
PSEN1-221ENST00000557293 CPNE5Q9HCH3 593 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 FBXL12Q9NXK8 326 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 SUN2Q9UH99 717 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 ADAMTS1Q9UHI8 967 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 GGA2Q9UJY4 613 aa13.1□□□□□ -0.31
PSEN1-221ENST00000557293 FAM47DPA6NHR8 397 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 STX6O43752 255 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 PABPC1P11940 636 aaKnown RBP13.09□□□□□ -0.31
PSEN1-221ENST00000557293 ACP1P24666 158 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 CD70P32970 193 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 CCR5P51681 352 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 ASIC1P78348 528 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 KNOP1Q1ED39 458 aaKnown RBP13.09□□□□□ -0.31
PSEN1-221ENST00000557293 PROX2Q3B8N5 592 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 ARHGAP40Q5TG30 622 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 FAM181AQ8N9Y4 354 aa13.09□□□□□ -0.31
PSEN1-221ENST00000557293 SNRNP27Q8WVK2 155 aaKnown RBP13.09□□□□□ -0.31
PSEN1-221ENST00000557293 NDRG1Q92597 394 aaKnown RBP13.09□□□□□ -0.31
PSEN1-221ENST00000557293 GOLGA1Q92805 767 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms