RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 GRIK1P39086 918 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 MTTPP55157 894 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 NUP107P57740 925 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 KRT72Q14CN4 511 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 PGS1Q32NB8 556 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 STRIP1Q5VSL9 837 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 C4orf22Q6V702 233 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 PCYOX1LQ8NBM8 494 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 ZNF384Q8TF68 577 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 SEC14L1Q92503 715 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 ATG4CQ96DT6 458 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 TSPAN17Q96FV3 270 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 TBL1YQ9BQ87 522 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 RRN3Q9NYV6 651 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 RNF112Q9ULX5 631 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 STAP1Q9ULZ2 295 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 DRG1Q9Y295 367 aaKnown RBP5.11□□□□□ -1.59
SYNE2-223ENST00000557005 ANKRD6Q9Y2G4 727 aa5.11□□□□□ -1.59
SYNE2-223ENST00000557005 SF3B1O75533 1304 aaKnown RBP eCLIP5.11□□□□□ -1.59
SYNE2-223ENST00000557005 SPDYE2BA6NHP3 402 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 M0R3G1 203 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 AP3B1O00203 1094 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 CYB561D2O14569 222 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 ALOX15BO15296 676 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 PSMD3O43242 534 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 FAM20BO75063 409 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 RTN3O95197 1032 aaPredicted RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 ASMTLO95671 621 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 HMBSP08397 361 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 CFHP08603 1231 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 SPDYE6P0CI01 402 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 KLRC2P26717 231 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 GRIA4P48058 902 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 RPL14P50914 215 aaKnown RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 MAP3K7CLP57077 242 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 GCNT1Q02742 428 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 WASHC5Q12768 1159 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 MXD4Q14582 209 aaPredicted RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 ADGRD1Q6QNK2 874 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 MPZL3Q6UWV2 235 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 UNC5AQ6ZN44 842 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 PODNQ7Z5L7 613 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 C4orf19Q8IY42 314 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 ZNF398Q8TD17 642 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 PHF21BQ96EK2 531 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 RTKNQ9BST9 563 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 TMEM109Q9BVC6 243 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 RNF19AQ9NV58 838 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 NDFIP2Q9NV92 336 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 WRAP73Q9P2S5 460 aaPredicted RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 NOCTQ9UK39 431 aaKnown RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 NOD1Q9Y239 953 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 MYO5AQ9Y4I1 1855 aaKnown RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 ZC3H4Q9UPT8 1303 aaKnown RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 TRDMT1O14717 391 aaKnown RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 MAGEB2O15479 319 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 MAP3K13O43283 966 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 ARHGEF9O43307 516 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 TM7SF2O76062 418 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 BCL10O95999 233 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 ATP5BP06576 529 aaKnown RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 MPSTP25325 297 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 CLK2P49760 499 aaKnown RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 RARRES1P49788 294 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 NOMO3P69849 1222 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 LAMTOR4Q0VGL1 99 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 LAMC2Q13753 1193 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 DMC1Q14565 340 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 CCDC85BQ15834 202 aaPredicted RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 SLC35G1Q2M3R5 365 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 SPDYAQ5MJ70 313 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 EGFL6Q8IUX8 553 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 SCUBE3Q8IX30 993 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 GIPC3Q8TF64 312 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 DCAKDQ8WVC6 231 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 CAPSLQ8WWF8 208 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 SNX19Q92543 992 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 APBB2Q92870 758 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 GPRASP2Q96D09 838 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 DGCR6LQ9BY27 220 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 ZNF518BQ9C0D4 1074 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 FZD1Q9UP38 647 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 SLIT2O94813 1529 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 LINC00854A0A1B0GVQ3 168 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 TSC22D2O75157 780 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 BAIAP3O94812 1187 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 NCAM1P13591 858 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 GRK2P25098 689 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 S100A5P33763 92 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 YWHAZP63104 245 aaKnown RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 MRPL28Q13084 256 aaKnown RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 LPIN1Q14693 890 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 PPM1JQ5JR12 505 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 SLC10A5Q5PT55 438 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 LDLRAP1Q5SW96 308 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 RNASEH2BQ5TBB1 312 aaKnown RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 RC3H1Q5TC82 1133 aaKnown RBP5.1□□□□□ -1.59
SYNE2-223ENST00000557005 REP15Q6BDI9 236 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 DPP9Q86TI2 863 aa5.1□□□□□ -1.59
SYNE2-223ENST00000557005 TRIM74Q86UV6 250 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms