RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 KLHL41O60662 606 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 GCATO75600 419 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 DPEP1P16444 411 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 MGAT1P26572 445 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 OLIG2Q13516 323 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 LAMB3Q13751 1172 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 STILQ15468 1287 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 GRAMD1BQ3KR37 738 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 MMEL1Q495T6 779 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 PGM2L1Q6PCE3 622 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 FBXL19Q6PCT2 694 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 OLFML1Q6UWY5 402 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 CMC1Q7Z7K0 106 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 SATL1Q86VE3 508 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 CDKL3Q8IVW4 592 aaPredicted RBP11.72□□□□□ -0.53
SRP54-213ENST00000556994 DNERQ8NFT8 737 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 PPP4R1Q8TF05 950 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 CLEC4CQ8WTT0 213 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 PGBD4Q96DM1 585 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 PPP1R36Q96LQ0 422 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 GCNAQ96QF7 691 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 LGMNQ99538 433 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 EPAS1Q99814 870 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 R3HDMLQ9H3Y0 253 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 IFT122Q9HBG6 1241 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 DMAP1Q9NPF5 467 aaPredicted RBP11.72□□□□□ -0.53
SRP54-213ENST00000556994 BARX2Q9UMQ3 279 aaPredicted RBP11.72□□□□□ -0.53
SRP54-213ENST00000556994 SORCS3Q9UPU3 1222 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 SOWAHBA6NEL2 793 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 ZNF195O14628 629 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 GLRA3O75311 464 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 GABBR2O75899 941 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 PGM3O95394 542 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 SERPINE1P05121 402 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 ERVK-10P10266 1014 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 MSX2P35548 267 aaPredicted RBP11.72□□□□□ -0.53
SRP54-213ENST00000556994 GTF2A2P52657 109 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 IGBP1P78318 339 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 TBL3Q12788 808 aaKnown RBP11.72□□□□□ -0.53
SRP54-213ENST00000556994 CBLBQ13191 982 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 HEATR6Q6AI08 1181 aaKnown RBP11.72□□□□□ -0.53
SRP54-213ENST00000556994 EFCAB12Q6NXP0 572 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 LCLAT1Q6UWP7 414 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 ADGRG6Q86SQ4 1221 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 ACOT1Q86TX2 421 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 PYROXD2Q8N2H3 581 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 ARHGAP18Q8N392 663 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 ACTRT2Q8TDY3 377 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 C2orf40Q9H1Z8 148 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 EVPLQ92817 2033 aa11.72□□□□□ -0.53
SRP54-213ENST00000556994 CAPN8A6NHC0 703 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 ZBTB14O43829 449 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 IL18RAPO95256 599 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 ATP5BP06576 529 aaKnown RBP11.71□□□□□ -0.53
SRP54-213ENST00000556994 ITGA2BP08514 1039 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 RALBP11234 206 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 VAV1P15498 845 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 TPSB2P20231 275 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 TYK2P29597 1187 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 MLH1P40692 756 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 ABCG1P45844 678 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 MBTD1Q05BQ5 628 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 NIPAL4Q0D2K0 466 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 TPSAB1Q15661 275 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 TTC30AQ86WT1 665 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 NDNQ99608 321 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 ZNF670Q9BS34 389 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 UBE2OQ9C0C9 1292 aaKnown RBP11.71□□□□□ -0.53
SRP54-213ENST00000556994 ZDHHC7Q9NXF8 308 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 HOXC10Q9NYD6 342 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 CLIC5Q9NZA1 410 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 DTLQ9NZJ0 730 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 COPG2Q9UBF2 871 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 ITGA11Q9UKX5 1188 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 PCDHGB4Q9UN71 923 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 G3BP2Q9UN86 482 aaKnown RBP11.71□□□□□ -0.53
SRP54-213ENST00000556994 PCDHGB5Q9Y5G0 923 aa11.71□□□□□ -0.53
SRP54-213ENST00000556994 NOP56O00567 594 aaKnown RBP11.71□□□□□ -0.54
SRP54-213ENST00000556994 PAPSS1O43252 624 aaPredicted RBP11.71□□□□□ -0.54
SRP54-213ENST00000556994 ABCE1P61221 599 aaKnown RBP11.71□□□□□ -0.54
SRP54-213ENST00000556994 SLC6A3Q01959 620 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 SEMA5AQ13591 1074 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 PDK3Q15120 406 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 SLC10A6Q3KNW5 377 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 SLC9B1Q4ZJI4 515 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 METTL7BQ6UX53 244 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 SESTD1Q86VW0 696 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 EGFL6Q8IUX8 553 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 HACE1Q8IYU2 909 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 PLD6Q8N2A8 252 aaKnown RBP11.71□□□□□ -0.54
SRP54-213ENST00000556994 FBXW8Q8N3Y1 598 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 ZNF781Q8N8C0 355 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 COLGALT1Q8NBJ5 622 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 ARNTL2Q8WYA1 636 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 ATP2A3Q93084 1043 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 NMD3Q96D46 503 aaKnown RBP11.71□□□□□ -0.54
SRP54-213ENST00000556994 CMTM5Q96DZ9 223 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 NT5C1AQ9BXI3 368 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 COG4Q9H9E3 785 aa11.71□□□□□ -0.54
SRP54-213ENST00000556994 RNF19AQ9NV58 838 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms