RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-215ENST00000556587 ALG13Q9NP73 1137 aaKnown RBP13.16□□□□□ -0.3
SRSF5-215ENST00000556587 RCOR3Q9P2K3 495 aaPredicted RBP13.16□□□□□ -0.3
SRSF5-215ENST00000556587 HCN4Q9Y3Q4 1203 aa13.16□□□□□ -0.3
SRSF5-215ENST00000556587 CHUKO15111 745 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 TYROBPO43914 113 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 INHBAP08476 426 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 KCNE1P15382 129 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 GNL1P36915 607 aaPredicted RBP13.15□□□□□ -0.3
SRSF5-215ENST00000556587 SNCBQ16143 134 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 DPYSL2Q16555 572 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 CDO1Q16878 200 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 FYB2Q5VWT5 728 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 ANKRD22Q5VYY1 191 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 CYB5D1Q6P9G0 228 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 CYP4V2Q6ZWL3 525 aaPredicted RBP13.15□□□□□ -0.3
SRSF5-215ENST00000556587 TTC30AQ86WT1 665 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 PARP9Q8IXQ6 854 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 HACE1Q8IYU2 909 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 C12orf29Q8N999 325 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 MCUQ8NE86 351 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 APPL2Q8NEU8 664 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 TMEM40Q8WWA1 233 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 CENPIQ92674 756 aaPredicted RBP13.15□□□□□ -0.3
SRSF5-215ENST00000556587 MRPL45Q9BRJ2 306 aaKnown RBP13.15□□□□□ -0.3
SRSF5-215ENST00000556587 VPS11Q9H270 941 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 TMEM51Q9NW97 253 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 USH1CQ9Y6N9 552 aa13.15□□□□□ -0.3
SRSF5-215ENST00000556587 PRR33A8MZF0 331 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 KPNA7A9QM74 516 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 HACD1B0YJ81 288 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 M0QZ92 97 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 PIRO00625 290 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 KCNN4O15554 427 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 HUS1O60921 280 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 ATP2C2O75185 946 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 MT-ND3P03897 115 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 ITGB1P05556 798 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 KRT4P19013 534 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
SRSF5-215ENST00000556587 SLC8A1P32418 973 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 RGS7P49802 495 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 TAF6P49848 677 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 MNAT1P51948 309 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 WDR4P57081 412 aaKnown RBP13.14□□□□□ -0.31
SRSF5-215ENST00000556587 ATP11AP98196 1134 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 PDE4CQ08493 712 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 TAF5Q15542 800 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 SMAD2Q15796 467 aaKnown RBP13.14□□□□□ -0.31
SRSF5-215ENST00000556587 C15orf59Q2T9L4 293 aaPredicted RBP13.14□□□□□ -0.31
SRSF5-215ENST00000556587 GALNTL6Q49A17 601 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 ICE2Q659A1 982 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 STRADAQ7RTN6 431 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 ZC3H18Q86VM9 953 aaKnown RBP13.14□□□□□ -0.31
SRSF5-215ENST00000556587 ADHFE1Q8IWW8 467 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 USP29Q9HBJ7 922 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 RAB6BQ9NRW1 208 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 TXLNGQ9NUQ3 528 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 TEX264Q9Y6I9 313 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 PIEZO1Q92508 2521 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 PAPSS1O43252 624 aaPredicted RBP13.14□□□□□ -0.31
SRSF5-215ENST00000556587 MGEA5O60502 916 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 SPAG7O75391 227 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 FAM155BO75949 473 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 RECQL4O94761 1208 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 STK10O94804 968 aaKnown RBP13.14□□□□□ -0.31
SRSF5-215ENST00000556587 TMEM63AO94886 807 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 ALADP13716 330 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 SSTR1P30872 391 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 GATMP50440 423 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 CDK16Q00536 496 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 BNIP1Q12981 228 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 MMRN1Q13201 1228 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 RIPK1Q13546 671 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 SOWAHAQ2M3V2 549 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 XKR4Q5GH76 650 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 HP1BP3Q5SSJ5 553 aaPredicted RBP13.14□□□□□ -0.31
SRSF5-215ENST00000556587 C1orf228Q6PIY5 440 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 EP400NLQ6ZTU2 488 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 SCUBE3Q8IX30 993 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 VPS52Q8N1B4 723 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 SPPL3Q8TCT6 385 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 SNRNP25Q9BV90 132 aaKnown RBP13.14□□□□□ -0.31
SRSF5-215ENST00000556587 CDHR5Q9HBB8 845 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 MLXIPLQ9NP71 852 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.14□□□□□ -0.312e-66■■□□□ 12.4
SRSF5-215ENST00000556587 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.14□□□□□ -0.314e-77■■□□□ 13
SRSF5-215ENST00000556587 ZNF180Q9UJW8 692 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 PHTF1Q9UMS5 762 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 GINS2Q9Y248 185 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 ZNF318Q5VUA4 2279 aa13.14□□□□□ -0.31
SRSF5-215ENST00000556587 LINC01565O15544 149 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 GCATO75600 419 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 GRAP2O75791 330 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 KRT37O76014 449 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRSF5-215ENST00000556587 RPA3P35244 121 aaPredicted RBP13.13□□□□□ -0.31
SRSF5-215ENST00000556587 ARL4AP40617 200 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 ELK3P41970 407 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 RASSF2P50749 326 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms