RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PCDHGA1Q9Y5H4 931 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 CKAP5Q14008 2032 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 KLRC4O43908 158 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 ATP5BP06576 529 aaKnown RBP12.41□□□□□ -0.42
ACTN1-221ENST00000556571 DLDP09622 509 aaKnown RBP12.41□□□□□ -0.42
ACTN1-221ENST00000556571 PDIA4P13667 645 aaKnown RBP12.41□□□□□ -0.42
ACTN1-221ENST00000556571 JUPP14923 745 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 C21orf59P57076 290 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 SLC8A3P57103 927 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 RACK1P63244 317 aaKnown RBP12.41□□□□□ -0.42
ACTN1-221ENST00000556571 TTC31Q49AM3 519 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-221ENST00000556571 RAB41Q5JT25 222 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 KCNT1Q5JUK3 1230 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 PM20D1Q6GTS8 502 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 INTS8Q75QN2 995 aaKnown RBP12.41□□□□□ -0.42
ACTN1-221ENST00000556571 CHST9Q7L1S5 443 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 ADIPOR2Q86V24 386 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 PIGZQ86VD9 579 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 CEP57L1Q8IYX8 460 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 AHI1Q8N157 1196 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.41□□□□□ -0.42
ACTN1-221ENST00000556571 ADAM32Q8TC27 787 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 TAS1R2Q8TE23 839 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 CYB5D2Q8WUJ1 264 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 SKA1Q96BD8 255 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 CRELD1Q96HD1 420 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 FAXDC2Q96IV6 333 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 ACE2Q9BYF1 805 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-221ENST00000556571 OLA1Q9NTK5 396 aaKnown RBP12.41□□□□□ -0.42
ACTN1-221ENST00000556571 ABCB8Q9NUT2 735 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 STOML2Q9UJZ1 356 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 NCKAP1Q9Y2A7 1128 aa12.41□□□□□ -0.42
ACTN1-221ENST00000556571 HBS1LQ9Y450 684 aaKnown RBP12.41□□□□□ -0.42
ACTN1-221ENST00000556571 ASH1LQ9NR48 2969 aaKnown RBP12.41□□□□□ -0.42
ACTN1-221ENST00000556571 BPTFQ12830 3046 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 A0A1B0GTQ1 180 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 PLK4O00444 970 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 VILLO15195 856 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 CALUO43852 315 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-221ENST00000556571 ZBED1O96006 694 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 C1SP09871 688 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 SLFN14P0C7P3 912 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 HNF1BP35680 557 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 GCLMP48507 274 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 TKTL1P51854 596 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 ENPEPQ07075 957 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 SFSWAPQ12872 951 aaKnown RBP12.4□□□□□ -0.42
ACTN1-221ENST00000556571 KMT5BQ4FZB7 885 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 ZNF394Q53GI3 561 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 C6orf118Q5T5N4 469 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 ADGRF1Q5T601 910 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 RESP18Q5W5W9 173 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 MBLAC2Q68D91 279 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 ZNF776Q68DI1 518 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-221ENST00000556571 KIAA0895LQ68EN5 471 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 LAYNQ6UX15 382 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 USP30Q70CQ3 517 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 KIAA0907Q7Z7F0 614 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-221ENST00000556571 FMNL3Q8IVF7 1028 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 GRAMD1CQ8IYS0 662 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 ZNF366Q8N895 744 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 ANKRD52Q8NB46 1076 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 PIP4K2CQ8TBX8 421 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 NXPE2Q96DL1 559 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 ORAI3Q9BRQ5 295 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 GGA2Q9UJY4 613 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 SCML1Q9UN30 329 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 TRAF3IP3Q9Y228 551 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 PTPRQQ9UMZ3 2332 aa12.4□□□□□ -0.42
ACTN1-221ENST00000556571 KALRNO60229 2985 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 A0A1W2PPC4 97 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 LATS1O95835 1130 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 IGHV4-34P06331 123 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 PABPC1P11940 636 aaKnown RBP12.39□□□□□ -0.43
ACTN1-221ENST00000556571 KRT13P13646 458 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 POLR2EP19388 210 aaKnown RBP12.39□□□□□ -0.43
ACTN1-221ENST00000556571 ME1P48163 572 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 IL9RQ01113 521 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 PPP3CAQ08209 521 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 MPP7Q5T2T1 576 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 ARHGAP17Q68EM7 881 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 LRRC69Q6ZNQ3 347 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 SLC4A11Q8NBS3 891 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 LSM14AQ8ND56 463 aaKnown RBP12.39□□□□□ -0.43
ACTN1-221ENST00000556571 GANCQ8TET4 914 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 RNF139Q8WU17 664 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 COL26A1Q96A83 441 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 TMEM176AQ96HP8 235 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 ELF4Q99607 663 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-221ENST00000556571 SERTAD1Q9UHV2 236 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 PCDHA7Q9UN72 937 aa12.39□□□□□ -0.43
ACTN1-221ENST00000556571 ENC1O14682 589 aa12.38□□□□□ -0.43
ACTN1-221ENST00000556571 ATXN7O15265 892 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 RRP8O43159 456 aaKnown RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 RNASEH1O60930 286 aaKnown RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 ZIC2O95409 532 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 LDOC1O95751 146 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-221ENST00000556571 ITGAVP06756 1048 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms