RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 TRIM60Q495X7 471 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 AGGF1Q8N302 714 aaeCLIP18.9■□□□□ 0.622e-17■□□□□ 8.1
SDR39U1-220ENST00000556548 MGARPQ8TDB4 240 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 RRN3Q9NYV6 651 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 E7ESA3 106 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 CDH16O75309 829 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 GCATO75600 419 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 USP46P62068 366 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 TLE2Q04725 743 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 SCAPQ12770 1279 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 SEMA3BQ13214 749 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 RSPO2Q6UXX9 243 aaPredicted RBP18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 SLC39A5Q6ZMH5 540 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 TAOK1Q7L7X3 1001 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 NPAS4Q8IUM7 802 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 SRRM1Q8IYB3 904 aaKnown RBP18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 VPS52Q8N1B4 723 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 DEPDC1BQ8WUY9 529 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 CASP10Q92851 521 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 P2RY11Q96G91 374 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 CNOT10Q9H9A5 744 aaKnown RBP18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 KCNK9Q9NPC2 374 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 OSER1Q9NX31 292 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 ZMYND8Q9ULU4 1186 aaPredicted RBP18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 A6NNZ2 444 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 SYN3O14994 580 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 CPB1P15086 417 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 EPHB2P29323 1055 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 TUBB8Q3ZCM7 444 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 RTP2Q5QGT7 225 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 ANKRD20A2Q5SQ80 823 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 ANKRD20A1Q5TYW2 823 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 ANKRD20A3Q5VUR7 823 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 BZW1Q7L1Q6 419 aaKnown RBP18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 NPWQ8N729 165 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 ATP11CQ8NB49 1132 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 FBF1Q8TES7 1133 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 EPN3Q9H201 632 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 MLXIPLQ9NP71 852 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 ABCC13Q9NSE7 274 aa18.89■□□□□ 0.61
SDR39U1-220ENST00000556548 C5orf60A6NFR6 353 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 KCNK1O00180 336 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 RNF103O00237 685 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 LRIG2O94898 1065 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 GRIA1P42261 906 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 AIF1P55008 147 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 LRRC14Q15048 493 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 PAFAH1B3Q15102 231 aaKnown RBP18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 RWDD4Q6NW29 188 aaKnown RBP18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 FUT10Q6P4F1 479 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 CAND1Q86VP6 1230 aaKnown RBP18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 DIS3LQ8TF46 1054 aaKnown RBP18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 BCL7CQ8WUZ0 217 aaPredicted RBP18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 APBB2Q92870 758 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 CFAP36Q96G28 342 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 RABGEF1Q9UJ41 708 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 PCDHB5Q9Y5E4 795 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 SMAPO00193 183 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 NDUFAB1O14561 156 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 GALTP07902 379 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 CCT5P48643 541 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 NFE2Q16621 373 aaPredicted RBP18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 NUP93Q8N1F7 819 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 SEZ6LQ9BYH1 1024 aa18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 PIH1D1Q9NWS0 290 aaKnown RBP18.88■□□□□ 0.61
SDR39U1-220ENST00000556548 PTPRDP23468 1912 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 HACD1B0YJ81 288 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 MOCS2O96007 188 aaPredicted RBP18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 ATP5DP30049 168 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 IFNAR2P48551 515 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 PDK1Q15118 436 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 PRKD1Q15139 912 aaPredicted RBP18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 ZNF280DQ6N043 979 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 PRSS55Q6UWB4 352 aaPredicted RBP18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 CRIPAKQ8N1N5 446 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 SCML4Q8N228 414 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 ANKRD42Q8N9B4 389 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 COLGALT1Q8NBJ5 622 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 CELF6Q96J87 481 aaKnown RBP18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 EPAS1Q99814 870 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 CRISPLD1Q9H336 500 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 LGALS13Q9UHV8 139 aa18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 SF3B1O75533 1304 aaKnown RBP eCLIP18.87■□□□□ 0.61
SDR39U1-220ENST00000556548 A0A0A0MRY4 1105 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 TMEM120BA0PK00 339 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 PHBP35232 272 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 MNX1P50219 401 aaPredicted RBP18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 MRPL58Q14197 206 aaKnown RBP18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 TTC31Q49AM3 519 aaPredicted RBP18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 RNF19BQ6ZMZ0 732 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 TMCO2Q7Z6W1 182 aaPredicted RBP18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 SPATA13Q96N96 652 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 SEPT5Q99719 369 aaPredicted RBP18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 TRIM56Q9BRZ2 755 aaKnown RBP18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 INTS9Q9NV88 658 aaKnown RBP18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 EURLQ9NYK6 297 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 ATP11BQ9Y2G3 1177 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 TEX264Q9Y6I9 313 aa18.86■□□□□ 0.61
SDR39U1-220ENST00000556548 VWA8A3KMH1 1905 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms