RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TUBA3CQ13748 450 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 GRM4Q14833 912 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 PSMD6Q15008 389 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 POSTNQ15063 836 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 CNN3Q15417 329 aaKnown RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 UGT8Q16880 541 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 FAM205BPQ63HN1 556 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 NAIF1Q69YI7 327 aaPredicted RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 TUBA3EQ6PEY2 450 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 USP51Q70EK9 711 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 LCA5Q86VQ0 697 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 RAB11FIP4Q86YS3 637 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 MAPKAPK5Q8IW41 473 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 ZFPM1Q8IX07 1006 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 DIS3L2Q8IYB7 885 aaKnown RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 LILRA3Q8N6C8 439 aaPredicted RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 OTUD6BQ8N6M0 293 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 FSIP1Q8NA03 581 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 OR5M3Q8NGP4 307 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 LRTOMTQ8WZ04 291 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 ST8SIA2Q92186 375 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 PGBD1Q96JS3 809 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 SPAG5Q96R06 1193 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 MNTQ99583 582 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 SDF4Q9BRK5 362 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 LRFN3Q9BTN0 628 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 NAT10Q9H0A0 1025 aaKnown RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 DBNDD1Q9H9R9 158 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 STARD7Q9NQZ5 370 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 ANO10Q9NW15 660 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 PARPBPQ9NWS1 579 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 ING1Q9UK53 422 aaPredicted RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 SLC13A4Q9UKG4 626 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 PCDHA7Q9UN72 937 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 PCDHGB2Q9Y5G2 931 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 COL11A2P13942 1736 aaPredicted RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 DDX60LQ5H9U9 1706 aaKnown RBP5.55□□□□□ -1.52
SRP54-211ENST00000556445 MYH8P13535 1937 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 TRIM64A6NGJ6 449 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 TRIM64BA6NI03 449 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 TRIM64CA6NLI5 447 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 ECE2O60344 883 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 MFAP3LO75121 409 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 BAG2O95816 211 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 DNTTP04053 509 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 PARP1P09874 1014 aaKnown RBP5.55□□□□□ -1.52
SRP54-211ENST00000556445 CYP2D6P10635 497 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 MTHFD1P11586 935 aaKnown RBP5.55□□□□□ -1.52
SRP54-211ENST00000556445 CKMT1AP12532 417 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 AKR1B1P15121 316 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 C5AR1P21730 350 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 CNTFP26441 200 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 TUBP50607 506 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 MAPK10P53779 464 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 NLRP5P59047 1200 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 TGFB2P61812 414 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 TPM4P67936 248 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 MEF2AQ02078 507 aaPredicted RBP5.55□□□□□ -1.52
SRP54-211ENST00000556445 DUSP2Q05923 314 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 PRKG1Q13976 671 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 TAF5Q15542 800 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 STX1AQ16623 288 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 PFKFB3Q16875 520 aaPredicted RBP5.55□□□□□ -1.52
SRP54-211ENST00000556445 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.55□□□□□ -1.52
SRP54-211ENST00000556445 ASPRV1Q53RT3 343 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 C19orf54Q5BKX5 351 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 DCAF17Q5H9S7 520 aaPredicted RBP5.55□□□□□ -1.52
SRP54-211ENST00000556445 FAM47AQ5JRC9 791 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 OTUD7BQ6GQQ9 843 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 ABHD15Q6UXT9 468 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 USP45Q70EL2 814 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 RTL10Q7L3V2 364 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 FOXP4Q8IVH2 680 aaPredicted RBP5.55□□□□□ -1.52
SRP54-211ENST00000556445 PRR18Q8N4B5 295 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 TEX9Q8N6V9 391 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 ZNF527Q8NB42 609 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 LSM14AQ8ND56 463 aaKnown RBP5.55□□□□□ -1.52
SRP54-211ENST00000556445 ENGASEQ8NFI3 743 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 PDLIM2Q96JY6 352 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 FUCA2Q9BTY2 467 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 SPZ1Q9BXG8 430 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 IDI2Q9BXS1 227 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 PANK2Q9BZ23 570 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 CPEB1Q9BZB8 566 aaKnown RBP5.55□□□□□ -1.52
SRP54-211ENST00000556445 BTBD1Q9H0C5 482 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 PLSCR4Q9NRQ2 329 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 ARGLU1Q9NWB6 273 aaPredicted RBP5.55□□□□□ -1.52
SRP54-211ENST00000556445 TMOD2Q9NZR1 351 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 SERPINB13Q9UIV8 391 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 MAFFQ9ULX9 164 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 EDARQ9UNE0 448 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 ECM29Q5VYK3 1845 aa5.55□□□□□ -1.52
SRP54-211ENST00000556445 SYNRGQ9UMZ2 1314 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 COL2A1P02458 1487 aaPredicted RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 SLX4Q8IY92 1834 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 A0A087X0M5 115 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 FAM237AA0A1B0GTK4 181 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 A0A1B0GX30 115 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 CAPN8A6NHC0 703 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 BTBD18B2RXH4 712 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms