RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 MMEP08473 750 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 CISD3P0C7P0 127 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 HOXD9P28356 352 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-205ENST00000556310 HOXC13P31276 330 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 SCNN1AP37088 669 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 GABRB2P47870 512 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 NOMO3P69849 1222 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 CDR2Q01850 454 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 SLC6A3Q01959 620 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 FILIP1LQ4L180 1135 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 FAM133BQ5BKY9 247 aaKnown RBP11.99□□□□□ -0.49
SLIRP-205ENST00000556310 EOGTQ5NDL2 527 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 OR6B2Q6IFH4 312 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 CCDC33Q8N5R6 958 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 ZNF513Q8N8E2 541 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-205ENST00000556310 TXNDC5Q8NBS9 432 aaKnown RBP11.99□□□□□ -0.49
SLIRP-205ENST00000556310 MSANTD4Q8NCY6 345 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 TSTD1Q8NFU3 115 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 ADAM32Q8TC27 787 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 DDI1Q8WTU0 396 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 SLC20A1Q8WUM9 679 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 SLC2A11Q9BYW1 496 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 FAM204AQ9H8W3 233 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 MUC22E2RYF6 1773 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-205ENST00000556310 CFAP54Q96N23 3096 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 PRRT4C9JH25 899 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 SGK1O00141 431 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 TEX33O43247 280 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 PXNP49023 591 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-205ENST00000556310 DGKEP52429 567 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 TPM4P67936 248 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 PITX1P78337 314 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-205ENST00000556310 CDK17Q00537 523 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 FMO1Q01740 532 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 EIF4EBP2Q13542 120 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-205ENST00000556310 CRY1Q16526 586 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 ZSCAN23Q3MJ62 389 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 DCAF6Q58WW2 860 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 MPP7Q5T2T1 576 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 EMC10Q5UCC4 262 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 NAA35Q5VZE5 725 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 EGFLAMQ63HQ2 1017 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 RNF43Q68DV7 783 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 TRIM72Q6ZMU5 477 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 ANKS1BQ7Z6G8 1248 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 ERICH1Q86X53 443 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 DEFB106AQ8N104 65 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 C18orf8Q96DM3 657 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 DDX50Q9BQ39 737 aaKnown RBP11.98□□□□□ -0.49
SLIRP-205ENST00000556310 CBX8Q9HC52 389 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 EBF1Q9UH73 591 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 HCN2Q9UL51 889 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 CKAP5Q14008 2032 aa11.98□□□□□ -0.49
SLIRP-205ENST00000556310 A0A1B0GTH6 734 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 A0A1W2PQC6 194 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 AXIN1O15169 862 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 HRO43593 1189 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 TSPAN3O60637 253 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 ADAM23O75077 832 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 GRAP2O75791 330 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 MOCS2O96007 188 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-205ENST00000556310 CYP1A1P04798 512 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-205ENST00000556310 SLC2A3P11169 496 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 CHRNB2P17787 502 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 NTSR1P30989 418 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 SLC6A4P31645 630 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 NOS2P35228 1153 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 EIF4HQ15056 248 aaKnown RBP11.97□□□□□ -0.49
SLIRP-205ENST00000556310 GEN1Q17RS7 908 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 FAM102AQ5T9C2 384 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-205ENST00000556310 PIK3R6Q5UE93 754 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 NADSYN1Q6IA69 706 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 RFWD3Q6PCD5 774 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 CACNA2D4Q7Z3S7 1137 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 RASSF3Q86WH2 238 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 XYLT1Q86Y38 959 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 ZNF557Q8N988 423 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-205ENST00000556310 HJURPQ8NCD3 748 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-205ENST00000556310 GAB3Q8WWW8 586 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 TMA16Q96EY4 203 aaKnown RBP11.97□□□□□ -0.49
SLIRP-205ENST00000556310 BTN2A3PQ96KV6 586 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 PRICKLE1Q96MT3 831 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-205ENST00000556310 REPIN1Q9BWE0 567 aaKnown RBP11.97□□□□□ -0.49
SLIRP-205ENST00000556310 ZDHHC4Q9NPG8 344 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.97□□□□□ -0.49
SLIRP-205ENST00000556310 DDIT4Q9NX09 232 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 RRN3Q9NYV6 651 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 RAB23Q9ULC3 237 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 CLEC4EQ9ULY5 219 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 MYO6Q9UM54 1294 aa11.97□□□□□ -0.49
SLIRP-205ENST00000556310 TYW5A2RUC4 315 aaKnown RBP11.96□□□□□ -0.49
SLIRP-205ENST00000556310 TK2O00142 265 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 NPC1O15118 1278 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 RPP40O75818 363 aaKnown RBP11.96□□□□□ -0.49
SLIRP-205ENST00000556310 ALDH1A2O94788 518 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 SERPINC1P01008 464 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 HOXB2P14652 356 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 HNRNPLP14866 589 aaKnown RBP eCLIP11.96□□□□□ -0.49
SLIRP-205ENST00000556310 MMP8P22894 467 aa11.96□□□□□ -0.49
SLIRP-205ENST00000556310 CCR1P32246 355 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms